PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG070010.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 177aa    MW: 21202 Da    PI: 7.9518
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG070010.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.22.2e-5581411129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvka...eekewyfFskrdkkyatgkrknratksgyWk 84 
                       +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL +             e++ewyfFs +d+ky+tg+r+nrat +g+Wk
  TRIDC5AG070010.3   8 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLTEcieehyG--IgyeEQNEWYFFSFKDRKYPTGTRTNRATMAGFWK 97 
                       69****************************.9***************864555441..1544777**************************** PP

               NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                       atg+dk+v++ +++l+g++ktLvfykgrap+g+ktdW+mheyrle
  TRIDC5AG070010.3  98 ATGRDKAVHE-RSRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 141
                       *********9.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MDSMESCVPP GFRFHPTDEE LVGYYLRKKV ASQKIDLDVI RDIDLYRIEP WDLTECIEEH  60
YGIGYEEQNE WYFFSFKDRK YPTGTRTNRA TMAGFWKATG RDKAVHERSR LIGMRKTLVF  120
YKGRAPNGQK TDWIMHEYRL ETDENAPPQS NRYFFLRVYS NRYYSLHSKL FECLCVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.16e-95NAC family protein