PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG068820.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 408aa    MW: 46408.9 Da    PI: 8.3704
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG068820.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.76.4e-11441063499
                       SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  34 ktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       +t  + ++ g ++W vk+  ++  ++ +l++GW +Fv a+g+ +g  +v++++   ++ l++k+f++
  TRIDC5AG068820.4  44 RTALVLSPFGkNVWPVKV--DRDAKGAFLGDGWPQFVAAHGIGVGWYLVIRHE--GCGVLTLKAFDA 106
                       344445544449******..*******************************65..588889999886 PP
2B346.18.8e-153413973286
                       --SEEEEEE.TTS-EEEEEE....EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3  32 esktltled.esgrsWevkliy..rkksgr.yvltkGWkeFvkangLkegDfvvFkldg 86 
                       +  ++tl++ e+++sWev+      ++s++   lt+GWk F+k+n+Lk+gD+++Fk+++
  TRIDC5AG068820.4 341 C--KITLKSvERNKSWEVEGVNyhPGTSRSyNCLTRGWKAFCKENELKAGDICTFKVVN 397
                       3..7999998999******94446444444689***********************654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MGLSSNCAKT IKIQQCVKLP DSKYLHINDE LAGCFGTEDH GDRRTALVLS PFGKNVWPVK  60
VDRDAKGAFL GDGWPQFVAA HGIGVGWYLV IRHEGCGVLT LKAFDASFVI KEFGLTITVL  120
SPAEIENAFA RKPQFIVPLQ RSFMEKMPIP PKFLQRGYIS EEDLNRPRPI ATFLTSWHIE  180
LKKDGPNVFF TGSEWPKFLA YFEIAETDVL LIKYQGCMNF SFETFQNGNN EHIEEKTSSS  240
QQSEQSQCQE EEHVSTRRRT QNNGKTPGAQ SQEEEHVCSR KRKQSEVKSM LDGSTTSQHR  300
KKALCELGST GSQAWLRKEI NELALKRYLH FPARFGFLER CKITLKSVER NKSWEVEGVN  360
YHPGTSRSYN CLTRGWKAFC KENELKAGDI CTFKVVNSTL WHVVIDHC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1279284SRKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31630.15e-07B3 family protein