PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG068290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 186aa MW: 20223.7 Da PI: 10.6534 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.4 | 0.00023 | 126 | 148 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cg F + L H+r+H TRIDC5AG068290.1 126 HDCHICGLGFETGQALGGHMRRH 148 56********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
EAREGGGASC VAGALSQHRL LDVHHHLGRL DRCAGEGGRK EEGTAGEGGG HFGGGRVRLQ 60 DLRPGLRDVP GAGRAPDQPP PWPPRAGARR RRRQGHHGAE KARGKARRCR NAREDVKIHV 120 DRQPQHDCHI CGLGFETGQA LGGHMRRHRE EMALSGAIDR WVALSEQETG HQAAAHRPPV 180 LLELFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46080.1 | 1e-08 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG068290.1 |