PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG068240.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 132aa    MW: 14286.3 Da    PI: 9.6193
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG068240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002290112123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C+ Cg  F     L  H+r+H
  TRIDC5AG068240.1  90 HQCHVCGLEFEMGQALGGHMRRH 112
                       79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MKHCRDQAQE EPLSLSLSLG AMADRTKKQR RGVAAGEFVC KTCSRAFPSF QALGGHRTSH  60
LRGHNGLALG LAAGSDQPGT KKTTDQKQAH QCHVCGLEFE MGQALGGHMR RHREQEAATT  120
AQAPPVLLQL FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46090.17e-22C2H2 family protein