PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG067060.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 352aa    MW: 37224.3 Da    PI: 9.5174
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG067060.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.8e-18103152255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g++++eIrdp     + +r +lg+f+taeeAa+a++aa+ ++ g
  TRIDC5AG067060.4 103 RYRGVRQRR-WGKFASEIRDPI----QgRRLWLGTFDTAEEAAAAYDAAKIRISG 152
                       69****998.**********82....36*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
LDMLAAAAGM ESAAAAAAEA EAEAAEAQPR GRVVRIIVHD ADATDSSSSE DESASPPLAP  60
MPTTKEERRR ERKKRRRVME AGRRDDSGPP QPQATGARTP SVRYRGVRQR RWGKFASEIR  120
DPIQGRRLWL GTFDTAEEAA AAYDAAKIRI SGSRRPADGA TGFPFSFPPP EPAKPTVLRL  180
PMPQPAKPTI LRPPMPQPAK QITSPPPPPP PPEPAKPAIS PPPLPAKPFA LPLKLRLKLS  240
FNAQVKDKGW NWCSAGDVKE EEDGDCDGEA KVGDLSIAGE VKVEGGGCAG EVKVEGGGCA  300
DGSKEAGSSS EVKAVKPMWA MITGKRKKRS GCGTRVGALH ASSVCVEEVG GT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16977RRERKKRRR
27478KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.11e-13ERF family protein