PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG066970.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 255aa MW: 28818.6 Da PI: 8.9808 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169 | 1.5e-52 | 17 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtd+elv +yL++k++g++l++ +i+evd+y+++Pw Lp ++ +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v TRIDC5AG066970.4 17 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYRFDPWALPDRALFGTREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVA 108 79****************************.88***************77778999************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++g+++g+kk Lvfy g+apkg+ktdW+mheyrl TRIDC5AG066970.4 109 PRGGRTMGIKKALVFYAGKAPKGVKTDWIMHEYRL 143 *********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MPAVRRRERD AEAELNLPPG FRFHPTDDEL VEHYLCRKAA GQRLPVPIIA EVDLYRFDPW 60 ALPDRALFGT REWYFFTPRD RKYPNGSRPN RAAGNGYWKA TGADKPVAPR GGRTMGIKKA 120 LVFYAGKAPK GVKTDWIMHE YRLADAGRAA ASKKGSLRLD DWVLCRLYNK KNEWEKMQLQ 180 QQGEEETMSH SHSWGEARTP ESEIVDNDPS LFQQATAAAF QAQSPAAAAA HQEMMATLMV 240 PKKEAADEAG RNDLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-87 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG066970.4 |