PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG066760.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 250aa MW: 26361.8 Da PI: 6.2604 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.1 | 5e-11 | 60 | 106 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h e+E+rRR+ri+s +++Lr +l + +K +Ka+ L kAve +++L TRIDC5AG066760.2 60 RNHREAEKRRRERIKSHLDRLRAVLACD-----PKIDKATLLAKAVERVREL 106 68************************98.....7*************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MFPAEASFAG AEAAMLPPFF VGSMWQSAPG GGAAALSEED EVAAAAAAEA AHDRAVAATR 60 NHREAEKRRR ERIKSHLDRL RAVLACDPKI DKATLLAKAV ERVRELKQRM DGVVGEAAAP 120 ASHLFPTEHD EIVVLASGGG AGGAAAVFEA SVCCDDRSDL LPGLIDTLRA LRLRTLRAEM 180 ATLGGRVRNV LVLARDAGGH ADDDYSTSSE DGGADFLKEA LRALVERQGA AAGDRPKRRR 240 VADMNMQAAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 237 | 241 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41130.1 | 1e-34 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG066760.2 |