PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG064540.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 181aa MW: 20157.5 Da PI: 7.7657 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.2 | 7.8e-10 | 60 | 107 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka++L + ++Y++ L+ TRIDC5AG064540.6 60 SHSLAERARREKITERMKILQDLVPGC----NKVIGKASVLDEIINYVQALE 107 8*************************9....677**************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
ITDAEAKRFK ANKSSDENGS FRKDAEADSR NASKAVDQNP PPPKQDFIHV RARRGQATDS 60 HSLAERARRE KITERMKILQ DLVPGCNKVI GKASVLDEII NYVQALERQI EFLSMKLEAV 120 NAHAHAHNGV ETFPTKDFAA PTYNTAPGLT FDPQTPREYA QGSPAAEWLH MQIGGTYERV 180 T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 9e-64 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG064540.6 |