PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG062780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 443aa    MW: 48640.5 Da    PI: 9.002
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG062780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.92.1e-351352262102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl k+y++++d++++ ++sws+++nsfvv+d++ fa+ +Lp+yFkh nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+++ll
  TRIDC5AG062780.1 135 FLAKTYDMVDDPATDAVVSWSATNNSFVVWDPHLFATVLLPRYFKHGNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 218
                       9********************999*****************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++ikr+k 
  TRIDC5AG062780.1 219 RNIKRRKP 226
                       ******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    
ASAGSHIPTR TASRTFHPPS QAKPSQAAAA ATATSLSSSA AAAAGARRAS SRAHSPALLS  60
RASRAHLRHI KACTGEKPHP ISGARRRGPL LVGPAAAMSH RMMMNPVKVE GDGRAGGGGA  120
PRPMDGLGDA GPTPFLAKTY DMVDDPATDA VVSWSATNNS FVVWDPHLFA TVLLPRYFKH  180
GNFSSFVRQL NTYGFRKVDP DRWEFANEGF LRGQRHLLRN IKRRKPTHGS QNQQSLGSYL  240
EVGNFGHDVE IDHLKRDRQL LMAEVVKLRQ EQQNTRSDLQ AMEKRLQGTE QKQQQMMSFL  300
ARVMQNPMFI HHLLSQSEMR KELEDAISNK RRRRIDQGPE AVDSMGTGST LEQGSQVMFE  360
QQEPVDSLVN GVISDLESSS VDTKGAEVQQ SVASSRSEQL RGRPSGELND DFWEDLLHEG  420
GLGEEASNLV VPDDMNLLAE KLD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1330335KRRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.16e-95HSF family protein