PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG060800.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 352aa MW: 37070.4 Da PI: 6.2819

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG060800.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.1	6.5e-18	171	217	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L+el+P++ K +Ka+iL +A+eY+ksLq TRIDC5AG060800.3 171 VHNQSERRRRDRINEKMRSLQELIPHC-----NKADKASILDEAIEYLKSLQ 217 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
WFADDVDALG NDVYAQLWNS IAVGAAPDVA CAALPGPSSH PPPPPPPPPM PSGIASSWTG 60 GDIGSTFCGS SLAPEVPAGG REEASAAPPS EGTRGASTRD GGAGTSSSGG SGSNFGGSGL 120 PSESGGHAHK RKGRGKDDSD SRSEDVECEA TEETKSSRQH GSKRRSRAAE VHNQSERRRR 180 DRINEKMRSL QELIPHCNKA DKASILDEAI EYLKSLQMQV QIMWMTTGMA PMMFPGSHQF 240 MPPMAVGMNS ACMPAAQGLN QMARVPYMNH SLSNHIPMSP SPAMNPMYIA NQMQNIQLRE 300 ASNHFLHLDG GQVAGPYAYT PQVAPKSQIP EVPDCTAVPI SGPGQPPAPD GI

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

WFADDVDALG NDVYAQLWNS IAVGAAPDVA CAALPGPSSH PPPPPPPPPM PSGIASSWTG  60
GDIGSTFCGS SLAPEVPAGG REEASAAPPS EGTRGASTRD GGAGTSSSGG SGSNFGGSGL  120
PSESGGHAHK RKGRGKDDSD SRSEDVECEA TEETKSSRQH GSKRRSRAAE VHNQSERRRR  180
DRINEKMRSL QELIPHCNKA DKASILDEAI EYLKSLQMQV QIMWMTTGMA PMMFPGSHQF  240
MPPMAVGMNS ACMPAAQGLN QMARVPYMNH SLSNHIPMSP SPAMNPMYIA NQMQNIQLRE  300
ASNHFLHLDG GQVAGPYAYT PQVAPKSQIP EVPDCTAVPI SGPGQPPAPD GI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	180	KRRSRAAEVHNQSERRRR
2	176	181	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	6e-35	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG060800.3