PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG060800.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 372aa MW: 39063.5 Da PI: 6.6265

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG060800.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56	7.1e-18	226	272	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L+el+P++ K +Ka+iL +A+eY+ksLq TRIDC5AG060800.2 226 VHNQSERRRRDRINEKMRSLQELIPHC-----NKADKASILDEAIEYLKSLQ 272 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MDGNGRSAAS HKKPLVADND LVELLWHNGG VVAQPQTHPR PAPSGLAGGG GETAAWFADD 60 VDALGNDVYA QLWNSIAVGA APDVACAALP GPSSHPPPPP PPPPMPSGIA SSWTGGDIGS 120 TFCGSSLAPE VPAGGREEAS AAPPSEGTRG ASTRDGGAGT SSSGGSGSNF GGSGLPSESG 180 GHAHKRKGRG KDDSDSRSED VECEATEETK SSRQHGSKRR SRAAEVHNQS ERRRRDRINE 240 KMRSLQELIP HCNKADKASI LDEAIEYLKS LQMQVQIMWM TTGMAPMMFP GSHQFMPPMA 300 VGMNSACMPA AQGLNQMARV PYMNHSLSNH IPMSPSPAMN PMYIANQMQN IQLREASNHF 360 LHLDGGQATA PQ

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MDGNGRSAAS HKKPLVADND LVELLWHNGG VVAQPQTHPR PAPSGLAGGG GETAAWFADD  60
VDALGNDVYA QLWNSIAVGA APDVACAALP GPSSHPPPPP PPPPMPSGIA SSWTGGDIGS  120
TFCGSSLAPE VPAGGREEAS AAPPSEGTRG ASTRDGGAGT SSSGGSGSNF GGSGLPSESG  180
GHAHKRKGRG KDDSDSRSED VECEATEETK SSRQHGSKRR SRAAEVHNQS ERRRRDRINE  240
KMRSLQELIP HCNKADKASI LDEAIEYLKS LQMQVQIMWM TTGMAPMMFP GSHQFMPPMA  300
VGMNSACMPA AQGLNQMARV PYMNHSLSNH IPMSPSPAMN PMYIANQMQN IQLREASNHF  360
LHLDGGQATA PQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	235	KRRSRAAEVHNQSERRRR
2	231	236	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	6e-35	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG060800.2