PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG059790.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 1215aa    MW: 135549 Da    PI: 6.769
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG059790.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.76.6e-07116165251
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkteke 51 
                       fY  Y++++GF+ r+ ++++s  +g +++++f C +  ++ ++ +k++++
  TRIDC5AG059790.9 116 FYYGYGERAGFKARTGSNRRSAGTGGMIMQRFLCCRGNYSYRKGNKAKDS 165
                       9*********************************9988777776663333 PP
2FAR175.41.2e-23440526190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY +YA ++GF+vrk  s+k+  n+ + +r +vCskeg+r ++ ++  + +++rae rtgC+a+++v+ +++gk++vt+ + +HnH+l 
  TRIDC5AG059790.9 440 EFYVSYAGTAGFNVRKGCSEKT-ANNVTRSRSYVCSKEGFRPKSVTA--EPKKQRAEIRTGCEAHMTVRITTSGKYVVTEYVADHNHDLE 526
                       6*****************9999.66669***************9988..9999**********************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1215 aa     Download sequence    
PLGPPASSSD PPPPAEPGEP LSRGYLSLRQ AGPASEEEAS PAPAGPPDER CRAMMEVVRK  60
DGGVGGDEGK WKVSKLVVEH NHVLEAAATG EAAPSAAAAA PELGMEFDSV QDAKGFYYGY  120
GERAGFKART GSNRRSAGTG GMIMQRFLCC RGNYSYRKGN KAKDSAAPKE VEEGAAGEGE  180
GEGKVGAHKK RGRKPGKKST PVIKVKNSVE KGVATAGTGN GQAVPSTENL GRGGDKKDAV  240
EKDVESVVEL EEEHVEVEDA AQDGAHDLGD GDDANSDAHE GEMEKEVEVK EKRGRGRPRK  300
AVTEDNALQA CVSTDLGVMA SQCAVDERKK ILNKYLSKRQ SRPASGRPAK IVSCQALAER  360
RKRGDGGRFL SSDGPLVTLL PSERRSKRLE KQNLKNEKKP ESKEDEIVEA EQDPETEVVA  420
GPGGEPKVGM VFLNEDKAYE FYVSYAGTAG FNVRKGCSEK TANNVTRSRS YVCSKEGFRP  480
KSVTAEPKKQ RAEIRTGCEA HMTVRITTSG KYVVTEYVAD HNHDLEAPLV DIQILRSQKL  540
LAKLQQPPDP PKVVLIPNDY KNYVRTRHTK DMQSGDAQAI SEYLQRMKGK NPSFFCSIQV  600
DEDDQFRNVF WADVKSVMDF NYFGDVVCVD TRYSTSDYCR PLLLFIGVNH HKEPTIFGTA  660
FIYDESVESF KWLFETFKSA MSGKQPRTVL TDRSTAISDA VASAWPGTAH RFSLLHLYQN  720
ATKVLSDTFQ GSETFAHDFS RSLYDYEEEG DFLSSWEILL AKYNLKDNKW LSKLYEDRER  780
WALPYGRDIF CADIAATLRS DNMDAILTGV LKTEIDLPYF FNRYDKFLEE KRLAEQQADY  840
LGVQMTQRVP PLRLLWQAAN TYTPALFEMF RLEFELVLSC MVYCCGEIGP ISEYEVTVKN  900
RPQVHFVRFD SSEYMVVCSC KKFEFVGLPC CHVLKVLEIK NIKELPPQYI LKRWRKDAQS  960
ESPKENFGFA AVDEDPKFTV SKRHNSLYRT LYKVAAKAAE NIEGQRFMES QYDQLLEQVE  1020
LLLQAKLHDK PSLSTIMRSQ QPNLPQNDTS NSEPRRASSK KNKNVENRRQ QQSPLESSKK  1080
KKGRQVVAGL VEPEEAELPL RVLAPTISND IPNHMSTPTN QFLAPNHIMQ APYVTQQFGL  1140
NSLQGFSGMT PFGQEQSPVH LQQPHLQQSP FHGGPQMHQA PPPDIQSLQF LSSNPQLGHQ  1200
TTDQGQYTIP VWDFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1292300KRGRGRPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-108FAR1 family protein