PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5AG057800.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 25376.5 Da PI: 9.2567 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.6 | 5.8e-05 | 173 | 218 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + n+r r R +r+ +++ L++l+ + +K + a++L +A YI+ L TRIDC5AG057800.2 173 SSNKRPRARKERLGERILALQQLVSPF-----GKTDTASVLHEALGYIRFL 218 679***********************8.....8****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 243 aa Download sequence |
MVKEEEVMAE AGGGGGGGRG YMDMLGLGEE AMADYFLCLS PSSSAAISTT TSASASTHAV 60 ASPTCASYLQ PPPAAPYHHV LRFGGRAEQQ YHGGGDVFGF QYYYYGAGGP AIPVAAPQKS 120 SPTTDCSSSI SSMSSSPTAT AASVISTSKP QPTKKRGSRS SGDQRKAAPP AASSNKRPRA 180 RKERLGERIL ALQQLVSPFG KTDTASVLHE ALGYIRFLHD QVQVLSSPYM QRLPPPPSPA 240 PLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G19500.1 | 7e-24 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5AG057800.2 |