PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG055690.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 179aa    MW: 20063.7 Da    PI: 10.5131
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG055690.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92.1e-095498554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      h +rEr+RR+++ ++++ L  ++ ++      K +K +i++ A  YI++L
  TRIDC5AG055690.3 54 HMMRERQRREKLSQSYADLHAMVSSR-----SKQDKNSIVQSAAVYIHEL 98
                      889**********************8.....6***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
PGTARGGTGN GINIHRRMMD VLGRMGPATE EEQRPQHQQQ QAAGAVESSR GFRHMMRERQ  60
RREKLSQSYA DLHAMVSSRS KQDKNSIVQS AAVYIHELKV AKEQLQRRND ELKAKILGHD  120
AQQQCVKVQF EVDEPSSSID SMIGALTRLK SMNVKTRGIH SILSGQRLTT EMNVETTVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-25bHLH family protein