PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG055560.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 210aa    MW: 23455.3 Da    PI: 6.8463
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG055560.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.51.4e-1574153190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ evGF +r  ks+++  ng+  +++ vC + gk+e+e+++         + r +C a++++++++dg w+v +    HnHel 
  TRIDC5AG055560.2  74 EFYNLYSWEVGFGIRYGKSRQN-VNGTKCMQEIVCGCAGKPERENSS---------SLRSDCAAMVRLHRTDDGGWYVLENCASHNHELL 153
                       6*****************9998.77889999*********9987666.........99******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
AVDSRSAVQS FSPSAPAAAS TTIRVGWKRR PRVARAPDER AAVVGRVPAL EAAIRGLARR  60
TDVVVNPSMA EAYEFYNLYS WEVGFGIRYG KSRQNVNGTK CMQEIVCGCA GKPERENSSS  120
LRSDCAAMVR LHRTDDGGWY VLENCASHNH ELLRTCAEKL HWPSHRHIDT YTKDLCETAA  180
GEQCESMEGL QYLWQPVWAN EECTVHEEVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.13e-09FAR1 family protein