PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG055150.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 439aa MW: 46963.8 Da PI: 7.5245

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG055150.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.8	1.5e-16	271	317	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq TRIDC5AG055150.5 271 VHNLSERRRRDRINEKMRALQELIPHC-----NKTDKASMLDEAIEYLKTLQ 317 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MGDISRPLGE DDDLMELLWC NGNVVMQSQG HRKLPPRPEK VPAPPVVQED EAGLWFPFAL 60 ADSLDKDIFQ DLFCEEPPGA AGVDGAGKIG RDGSSAVSAA SDLMPPPKST HNAGGVLSDL 120 VQARAGKAAM EEGASSTLSA MGASFCGSNQ VQVQGAVSEQ GRAGHTTAYG GGGAGSALPS 180 AVGSGNANAR GRGHEATVAS SSGRSNYSFG VTTTTGTEPT STSHRSSKRK RGLDTEDSES 240 PSEDAESESL ALERKPPQKL TTARRSRAAE VHNLSERRRR DRINEKMRAL QELIPHCNKT 300 DKASMLDEAI EYLKTLQMQV QMMWMGGGMA PPAVMFPGMQ MHQYLPQMGP PSMARMPFMA 360 PPQQGHGVSL PEQYAHFLGV NPHHLQPPSH HPHHHQVPST AKTISISNAP AVFFPLPTLT 420 RKMDVSSGSI SRRRWATTR

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MGDISRPLGE DDDLMELLWC NGNVVMQSQG HRKLPPRPEK VPAPPVVQED EAGLWFPFAL  60
ADSLDKDIFQ DLFCEEPPGA AGVDGAGKIG RDGSSAVSAA SDLMPPPKST HNAGGVLSDL  120
VQARAGKAAM EEGASSTLSA MGASFCGSNQ VQVQGAVSEQ GRAGHTTAYG GGGAGSALPS  180
AVGSGNANAR GRGHEATVAS SSGRSNYSFG VTTTTGTEPT STSHRSSKRK RGLDTEDSES  240
PSEDAESESL ALERKPPQKL TTARRSRAAE VHNLSERRRR DRINEKMRAL QELIPHCNKT  300
DKASMLDEAI EYLKTLQMQV QMMWMGGGMA PPAVMFPGMQ MHQYLPQMGP PSMARMPFMA  360
PPQQGHGVSL PEQYAHFLGV NPHHLQPPSH HPHHHQVPST AKTISISNAP AVFFPLPTLT  420
RKMDVSSGSI SRRRWATTR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	281	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	1e-25	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG055150.5