PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG054920.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 254aa    MW: 28149.6 Da    PI: 4.6814
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG054920.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.27.6e-08545142
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcks 42
                      +++WT eE+  l  +++++G g+W++I +     R+  +c+s
  TRIDC5AG054920.5  5 KQKWTSEEEAALRAGIARYGVGSWRLILKDDD-FRSILSCRS 45
                      79**************************9988.888888886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MGARKQKWTS EEEAALRAGI ARYGVGSWRL ILKDDDFRSI LSCRSNVDLK GRTAMKKNRA  60
APRRNDHPMA NSTVASDVDD EIVDEQPIAS MSSELWNVSI PKKSRSRLNN IILESVKNLN  120
EPTGSHSTTI AKYIEEEYWP PSDFDRMLSA NLKDLTTSGE LIEVNRKYRI APAPGSMYSE  180
GRSPETLLLE DMQREPQKIE SDDIKTLTKS QVDAELADMI TMTAEEAASA AARAIAEAEA  240
LMAEAEAATR DAEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.15e-44MYB_related family protein