PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG054920.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 197aa MW: 22321.1 Da PI: 6.538 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.3 | 1.8e-08 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT eE+ l +++++G g+W++I + R+ ++k++w++ TRIDC5AG054920.4 5 KQKWTSEEEAALRAGIARYGVGSWRLILKDDDfrsilSCRSNVDLKDKWRN 55 79**************************99885566555666666666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MGARKQKWTS EEEAALRAGI ARYGVGSWRL ILKDDDFRSI LSCRSNVDLK DKWRNINVFF 60 TESGSMDKGR TAMKKNRAAP RRNDHPMANS TVASDVDDEI VDEQPIASMS SELWNVSIPK 120 KSRSRLNNII LESVKNLNEP TGSHSTTIAK YIEEEYWPPS DFDRMLSANL KDLTTSGELI 180 EGKSQVQDCT CTWFNVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 1e-47 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG054920.4 |