PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC5AG054530.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YA

Protein Properties

Length: 370aa MW: 39972.2 Da PI: 9.9567

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG054530.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	97.6	1.3e-30	206	262	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d+p+YVNaKQy++Il+RR +Rak+e+e++l k+rkpylheSRh+hA+rR+Rg+gGrF TRIDC5AG054530.2 206 DAPIYVNAKQYEGILRRRRARAKVERENQL-VKGRKPYLHESRHRHAMRRARGTGGRF 262 68**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
SCLPLLDGLP QLSLRCERAL LDRFPSPRRR RPPAGRPCRR SGAAMMSFKG HDGFGQASNG 60 GGGGASVPWW TVSQMLYGEP GASLSSSPEA EPRRDAQFQV VPRAQGILDP LPAPKSGAPE 120 VLKFSVFQGN LESGGNKGEK PMEHSATIAL QSPLPEYNSR FEFGPGPSMM SSGYPSAEQC 180 YGLLTTYAMK STPGGRLLLP LNATADAPIY VNAKQYEGIL RRRRARAKVE RENQLVKGRK 240 PYLHESRHRH AMRRARGTGG RFLNTKKEGN GKDAGGGGKR AECAPPTRFA TSPSSVIPSN 300 PHSRSSISSL SGSEVSSMYD HDDVDHYNSI EHLRTPFFTP LPIIMDGEHG ASAPFKWATA 360 ADGCCELLKA

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

SCLPLLDGLP QLSLRCERAL LDRFPSPRRR RPPAGRPCRR SGAAMMSFKG HDGFGQASNG  60
GGGGASVPWW TVSQMLYGEP GASLSSSPEA EPRRDAQFQV VPRAQGILDP LPAPKSGAPE  120
VLKFSVFQGN LESGGNKGEK PMEHSATIAL QSPLPEYNSR FEFGPGPSMM SSGYPSAEQC  180
YGLLTTYAMK STPGGRLLLP LNATADAPIY VNAKQYEGIL RRRRARAKVE RENQLVKGRK  240
PYLHESRHRH AMRRARGTGG RFLNTKKEGN GKDAGGGGKR AECAPPTRFA TSPSSVIPSN  300
PHSRSSISSL SGSEVSSMYD HDDVDHYNSI EHLRTPFFTP LPIIMDGEHG ASAPFKWATA  360
ADGCCELLKA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	256	RHRHAMRRAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06510.2	1e-23	NF-YA family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG054530.2