PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG053140.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 480aa    MW: 53563.9 Da    PI: 5.5075
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG053140.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.22.6e-1215763399
                       -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                       s  ++le+++gr+++v++   k+   ++lt+GW++Fv+an++++gD ++F + g+s+f  +v++f++
  TRIDC5AG053140.11 15 SEPIKLETPDGRTYSVEF--AKYV-LIILTTGWRDFVEANHIQQGDPMLFVYGGNSTF--KVHIFNS 76
                       4569**************..7765.689************************999999..9999875 PP
2B331.23.9e-101752343698
                        EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                 B3  36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        +++  ++  ++ v    + +++++vl++GW +Fv +++++++Df++F  +g  +++l+v v++
  TRIDC5AG053140.11 175 VKIVAPDKSTYIVGA-KKHNDDQIVLQSGWDRFVTDQRIQQNDFLIFIIEG--GTRLKVLVLD 234
                        566666666677777.3556667*************************765..6667888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
PREVTSQLTD LIPDSEPIKL ETPDGRTYSV EFAKYVLIIL TTGWRDFVEA NHIQQGDPML  60
FVYGGNSTFK VHIFNSPGRN KFLSSSEPPC DHHVPSEQVV PHPEHVDSSA HFGYTMLPGS  120
FVTKAQDDKL LEWANTIKSG FPLFVAAMDE SNVSLNDCHV YIPLWLVGQF KEEVVKIVAP  180
DKSTYIVGAK KHNDDQIVLQ SGWDRFVTDQ RIQQNDFLIF IIEGGTRLKV LVLDPSGSEK  240
TFAMGNSSKV QEKPPLPPTV TNRSSEDNEV ADLSSDDEVI DPSCDDDEVV GKDTTASRRE  300
QPLRSCRAKA ETMASTSCPS TKSGRRKAGN SNEAGLKAPM PNKSYILSEG ASLSKQQEEK  360
VKEKVRAIGS DFPVFVRVMT VHGVWRPIQL RFCVEYGSAC PLPLQQTPLL LGIEGSDMQW  420
PSMLVVKKYK KGWWISSFWS DLVLEAGMEA GDICLVELAD RSSERLRMTV HLIRKSEMQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-12B3 family protein