PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG051060.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 842aa MW: 92340.9 Da PI: 7.1245

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG051060.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.6	2.5e-28	526	576	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5AG051060.4 526 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 576 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 842 aa Download sequence
MEGGDAPPGI SMGRAMSSEG DLDLLEQLLS GDNAWLEVAP NTSRSPNFFA SPSTFLSDAT 60 ATTTTTPAGA NSTLWIPPAS STVRQRFEQA LDYIKQMQRD AGMLVQLWVP QKNCDGKLVL 120 TTSGQPFTLD NTSDRLMQFR DVSTHYHFSA DVGSEASPVG LPGRVFIGKL PEWSPDVRLF 180 TSYEYPRVKY AQDLDVHGTM GLPVFEKGSY SCLGVMELIM TRQKLNFTSE INDICRALQA 240 VNLRSTEVSS TPRATKFNSA SYKDALPEIL EVLRAACVTH NLPLAQTWVT CAQQGKGGSR 300 HTDENYPYCI STIDTACYVN DPQMQNFHDS CSDHHLLRGQ GVAGKAFETN QPCFLPDIGS 360 SAKEHYPLSH HAKIFNLKGA VAIRLRCTRT GTADFVLEFF LPTNCEALEE QKAVLDSLSG 420 TMRSACRTLR VVTDKEIGDE EMLEVNELNS FGPQGKNKVE ELSFGNQATE HREEASWTSL 480 ARTSKESDLA ELSMHGMLSP VGQGLSPAGA QTSAQGSKGK RRTKTEKTVS LPVLRQYFAG 540 SLKDAARSLG VCPTTLKRIC RQHGINRWPS RKIKKVDHSL RKLQQIIDSV HGGETAFQLN 600 TLYKDLTNTS VSSDNNLSGS VTVPPHKQSN LTDFEGHRHH RLSSNVPSTS HSHSSCSQSS 660 DSSPSSCSGG STKHPPQAGV DLLMSGNPVN HSPVQTLQTE NASIRGHFPV QEAPDLLHNL 720 NQQALGGQHS SRSPSPPKQN ADAGMRIKAT FGSEKVRFRL KPECSFQELK QEMARRLSIV 780 DTSFLIVKYL DDDLEWVLMT CDADLQECLH VYKLANLQTV KISVHLAPIP EARVTIGHTG 840 LS

Sequence ? help Back to Top

Protein Sequence Length: 842 aa Download sequence

MEGGDAPPGI SMGRAMSSEG DLDLLEQLLS GDNAWLEVAP NTSRSPNFFA SPSTFLSDAT  60
ATTTTTPAGA NSTLWIPPAS STVRQRFEQA LDYIKQMQRD AGMLVQLWVP QKNCDGKLVL  120
TTSGQPFTLD NTSDRLMQFR DVSTHYHFSA DVGSEASPVG LPGRVFIGKL PEWSPDVRLF  180
TSYEYPRVKY AQDLDVHGTM GLPVFEKGSY SCLGVMELIM TRQKLNFTSE INDICRALQA  240
VNLRSTEVSS TPRATKFNSA SYKDALPEIL EVLRAACVTH NLPLAQTWVT CAQQGKGGSR  300
HTDENYPYCI STIDTACYVN DPQMQNFHDS CSDHHLLRGQ GVAGKAFETN QPCFLPDIGS  360
SAKEHYPLSH HAKIFNLKGA VAIRLRCTRT GTADFVLEFF LPTNCEALEE QKAVLDSLSG  420
TMRSACRTLR VVTDKEIGDE EMLEVNELNS FGPQGKNKVE ELSFGNQATE HREEASWTSL  480
ARTSKESDLA ELSMHGMLSP VGQGLSPAGA QTSAQGSKGK RRTKTEKTVS LPVLRQYFAG  540
SLKDAARSLG VCPTTLKRIC RQHGINRWPS RKIKKVDHSL RKLQQIIDSV HGGETAFQLN  600
TLYKDLTNTS VSSDNNLSGS VTVPPHKQSN LTDFEGHRHH RLSSNVPSTS HSHSSCSQSS  660
DSSPSSCSGG STKHPPQAGV DLLMSGNPVN HSPVQTLQTE NASIRGHFPV QEAPDLLHNL  720
NQQALGGQHS SRSPSPPKQN ADAGMRIKAT FGSEKVRFRL KPECSFQELK QEMARRLSIV  780
DTSFLIVKYL DDDLEWVLMT CDADLQECLH VYKLANLQTV KISVHLAPIP EARVTIGHTG  840
LS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG051060.4