PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG051060.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 519aa MW: 56904.1 Da PI: 8.2078

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG051060.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.5	1.3e-28	203	253	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5AG051060.3 203 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 253 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MQNFHDSCSD HHLLRGQGVA GKAFETNQPC FLPDIGSSAK EHYPLSHHAK IFNLKGAVAI 60 RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR SACRTLRVVT DKEIGDEEML 120 EVNELNSFGP QGKNKVEELS FGNQATEHRE EASWTSLART SKESDLAELS MHGMLSPVGQ 180 GLSPAGAQTS AQGSKGKRRT KTEKTVSLPV LRQYFAGSLK DAARSLGVCP TTLKRICRQH 240 GINRWPSRKI KKVDHSLRKL QQIIDSVHGG ETAFQLNTLY KDLTNTSVSS DNNLSGSVTV 300 PPHKQSNLTD FEGHRHHRLS SNVPSTSHSH SSCSQSSDSS PSSCSGGSTK HPPQAGVDLL 360 MSGNPVNHSP VQTLQTENAS IRGHFPVQEA PDLLHNLNQQ ALGGQHSSRS PSPPKQNADA 420 GMRIKATFGS EKVRFRLKPE CSFQELKQEM ARRLSIVDTS FLIVKYLDDD LEWVLMTCDA 480 DLQECLHVYK LANLQTVKIS VHLAPIPEAR VTIGHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MQNFHDSCSD HHLLRGQGVA GKAFETNQPC FLPDIGSSAK EHYPLSHHAK IFNLKGAVAI  60
RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR SACRTLRVVT DKEIGDEEML  120
EVNELNSFGP QGKNKVEELS FGNQATEHRE EASWTSLART SKESDLAELS MHGMLSPVGQ  180
GLSPAGAQTS AQGSKGKRRT KTEKTVSLPV LRQYFAGSLK DAARSLGVCP TTLKRICRQH  240
GINRWPSRKI KKVDHSLRKL QQIIDSVHGG ETAFQLNTLY KDLTNTSVSS DNNLSGSVTV  300
PPHKQSNLTD FEGHRHHRLS SNVPSTSHSH SSCSQSSDSS PSSCSGGSTK HPPQAGVDLL  360
MSGNPVNHSP VQTLQTENAS IRGHFPVQEA PDLLHNLNQQ ALGGQHSSRS PSPPKQNADA  420
GMRIKATFGS EKVRFRLKPE CSFQELKQEM ARRLSIVDTS FLIVKYLDDD LEWVLMTCDA  480
DLQECLHVYK LANLQTVKIS VHLAPIPEAR VTIGHTGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	2e-81	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG051060.3