PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG051060.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 899aa MW: 98595.9 Da PI: 7.0438

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG051060.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.5	2.7e-28	583	633	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl +l++yF++++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC5AG051060.1 583 EKTVSLPVLRQYFAGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 633 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 899 aa Download sequence
MMCSPLPPSP RNPNTNASTS DTKIFPRPPP PSNTWFTQDA LLGFEQERTS SEGSFTCMEG 60 GDAPPGISMG RAMSSEGDLD LLEQLLSGDN AWLEVAPNTS RSPNFFASPS TFLSDATATT 120 TTTPAGANST LWIPPASSTV RQRFEQALDY IKQMQRDAGM LVQLWVPQKN CDGKLVLTTS 180 GQPFTLDNTS DRLMQFRDVS THYHFSADVG SEASPVGLPG RVFIGKLPEW SPDVRLFTSY 240 EYPRVKYAQD LDVHGTMGLP VFEKGSYSCL GVMELIMTRQ KLNFTSEIND ICRALQAVNL 300 RSTEVSSTPR ATKFNSASYK DALPEILEVL RAACVTHNLP LAQTWVTCAQ QGKGGSRHTD 360 ENYPYCISTI DTACYVNDPQ MQNFHDSCSD HHLLRGQGVA GKAFETNQPC FLPDIGSSAK 420 EHYPLSHHAK IFNLKGAVAI RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR 480 SACRTLRVVT DKEIGDEEML EVNELNSFGP QGKNKVEELS FGNQATEHRE EASWTSLART 540 SKESDLAELS MHGMLSPVGQ GLSPAGAQTS AQGSKGKRRT KTEKTVSLPV LRQYFAGSLK 600 DAARSLGVCP TTLKRICRQH GINRWPSRKI KKVDHSLRKL QQIIDSVHGG ETAFQLNTLY 660 KDLTNTSVSS DNNLSGSVTV PPHKQSNLTD FEGHRHHRLS SNVPSTSHSH SSCSQSSDSS 720 PSSCSGGSTK HPPQAGVDLL MSGNPVNHSP VQTLQTENAS IRGHFPVQEA PDLLHNLNQQ 780 ALGGQHSSRS PSPPKQNADA GMRIKATFGS EKVRFRLKPE CSFQELKQEM ARRLSIVDTS 840 FLIVKYLDDD LEWVLMTCDA DLQECLHVYK LANLQTVKIS VHLAPIPEAR VTIGHTGLS

Sequence ? help Back to Top

Protein Sequence Length: 899 aa Download sequence

MMCSPLPPSP RNPNTNASTS DTKIFPRPPP PSNTWFTQDA LLGFEQERTS SEGSFTCMEG  60
GDAPPGISMG RAMSSEGDLD LLEQLLSGDN AWLEVAPNTS RSPNFFASPS TFLSDATATT  120
TTTPAGANST LWIPPASSTV RQRFEQALDY IKQMQRDAGM LVQLWVPQKN CDGKLVLTTS  180
GQPFTLDNTS DRLMQFRDVS THYHFSADVG SEASPVGLPG RVFIGKLPEW SPDVRLFTSY  240
EYPRVKYAQD LDVHGTMGLP VFEKGSYSCL GVMELIMTRQ KLNFTSEIND ICRALQAVNL  300
RSTEVSSTPR ATKFNSASYK DALPEILEVL RAACVTHNLP LAQTWVTCAQ QGKGGSRHTD  360
ENYPYCISTI DTACYVNDPQ MQNFHDSCSD HHLLRGQGVA GKAFETNQPC FLPDIGSSAK  420
EHYPLSHHAK IFNLKGAVAI RLRCTRTGTA DFVLEFFLPT NCEALEEQKA VLDSLSGTMR  480
SACRTLRVVT DKEIGDEEML EVNELNSFGP QGKNKVEELS FGNQATEHRE EASWTSLART  540
SKESDLAELS MHGMLSPVGQ GLSPAGAQTS AQGSKGKRRT KTEKTVSLPV LRQYFAGSLK  600
DAARSLGVCP TTLKRICRQH GINRWPSRKI KKVDHSLRKL QQIIDSVHGG ETAFQLNTLY  660
KDLTNTSVSS DNNLSGSVTV PPHKQSNLTD FEGHRHHRLS SNVPSTSHSH SSCSQSSDSS  720
PSSCSGGSTK HPPQAGVDLL MSGNPVNHSP VQTLQTENAS IRGHFPVQEA PDLLHNLNQQ  780
ALGGQHSSRS PSPPKQNADA GMRIKATFGS EKVRFRLKPE CSFQELKQEM ARRLSIVDTS  840
FLIVKYLDDD LEWVLMTCDA DLQECLHVYK LANLQTVKIS VHLAPIPEAR VTIGHTGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	1e-180	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG051060.1