PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG050390.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 736aa MW: 82818.1 Da PI: 6.7817

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG050390.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.5e-11	650	695	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR +i +++ +L+ l+P+ k + +++L +Av+YIk+Lq TRIDC5AG050390.2 650 SIAERVRRTKISERLRNLQGLVPNM----EKQTNTSDMLDMAVDYIKELQ 695 589*******************6....4679**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MHKPEQWDYV NKSLGYGSRT NPTSEGMKQV LNLSYSNLPE HMKACVMYLG IYQENYIIQK 60 DDLVKQWIAE GFIRATEEKD KEEISRNYFN ELISSRMIQP VHINDNDDVL SCSVHYMVLD 120 FVSHKSTEEN FVTTIDHYQT TARLADKVRR LSLHFGNAEA TPPANMSLSQ VRTLAFFGVF 180 KCLPSIVEFG LLQVLILHLC GDDESICFDL TRICELFRLR YLHVTSNVTL EVQQTQIRGL 240 QYLESLKIDT GVSAVLSDIV HLPSLLHLSL PVGTNLPNRI GQMTSLCTLG YFDLCATSVE 300 NVHSLGELKS LWDLRFTCST VHSCHLKSKM DSVGSILAKL SNLRSLTLKP SSILDAGPSS 360 ISISCDGLSS VPSPPAFLQR FEWSPSICTF SSLPKWIRHL DKLCILKIGI TELAWEDVDV 420 LRGLPALTVL SLYVRAKPVE RIVFNKTGFS ALKYFKLWCS VPWLEFEVDA MPNLRKLKLG 480 FDVHGADKLG PVGIEHLSSL KDISVKIGGV STDDPDRRAA ESVLSHAINM HPTRPISNIQ 540 CVDGMFTSKD DKNSGVELQK QYKIIDDDAV EQSVVLQMGS SEDAQSRCLD RQNAADKQVR 600 WMDIGEKTQE LIPNIEKKDH AKQVRMEEIS YRIQELVPRI KKDRASDGRS IAERVRRTKI 660 SERLRNLQGL VPNMEKQTNT SDMLDMAVDY IKELQMKTKA MKEEEANCTC LPSKQKHSPA 720 DEAQPPVPGA KQADAG

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MHKPEQWDYV NKSLGYGSRT NPTSEGMKQV LNLSYSNLPE HMKACVMYLG IYQENYIIQK  60
DDLVKQWIAE GFIRATEEKD KEEISRNYFN ELISSRMIQP VHINDNDDVL SCSVHYMVLD  120
FVSHKSTEEN FVTTIDHYQT TARLADKVRR LSLHFGNAEA TPPANMSLSQ VRTLAFFGVF  180
KCLPSIVEFG LLQVLILHLC GDDESICFDL TRICELFRLR YLHVTSNVTL EVQQTQIRGL  240
QYLESLKIDT GVSAVLSDIV HLPSLLHLSL PVGTNLPNRI GQMTSLCTLG YFDLCATSVE  300
NVHSLGELKS LWDLRFTCST VHSCHLKSKM DSVGSILAKL SNLRSLTLKP SSILDAGPSS  360
ISISCDGLSS VPSPPAFLQR FEWSPSICTF SSLPKWIRHL DKLCILKIGI TELAWEDVDV  420
LRGLPALTVL SLYVRAKPVE RIVFNKTGFS ALKYFKLWCS VPWLEFEVDA MPNLRKLKLG  480
FDVHGADKLG PVGIEHLSSL KDISVKIGGV STDDPDRRAA ESVLSHAINM HPTRPISNIQ  540
CVDGMFTSKD DKNSGVELQK QYKIIDDDAV EQSVVLQMGS SEDAQSRCLD RQNAADKQVR  600
WMDIGEKTQE LIPNIEKKDH AKQVRMEEIS YRIQELVPRI KKDRASDGRS IAERVRRTKI  660
SERLRNLQGL VPNMEKQTNT SDMLDMAVDY IKELQMKTKA MKEEEANCTC LPSKQKHSPA  720
DEAQPPVPGA KQADAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	2e-25	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG050390.2