PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG050380.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 1482aa MW: 165398 Da PI: 7.2251

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG050380.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	83.2	2.5e-26	1333	1392	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +Dg++WrKYGqK++ gs +pr+Y+rCt++ gCpv+k+v+r+++dp +++++Y+geH++ TRIDC5AG050380.4 1333 EDGFSWRKYGQKDIIGSMHPRAYFRCTHRhvkGCPVTKQVQRTSTDPLLFDVVYHGEHTC 1392 8*************************99999***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1482 aa Download sequence
MGDSALHLAA RAGNVALVQK IFADCDPELV AELTDHQNQD GETALYVSAE MGHVEVVCEI 60 LKVCDLHSAF LKAHNSFDAF HIAAKQGHLV VLQELLKAFP ALAMTTNSVN ATALYTAALH 120 RHIGIVNLLL DTDPRLARIA RNNGKTALHI AARLGNVEVV VLLLNKDPAT VFRIDRKGQT 180 AVHMASKGHN AEILLELLKP DVSVIHLEDN KGDRPLHVAT RKGKTIIVQT LISIEEIDIN 240 AINGAGETAF AIAEKLGNEE LVNILREAGG VTVEEQVNPP KSIKRFKQTH DVQSQIKQKR 300 RTNMHFHTIR KSSQKLHTEA PVCALADAMF RLPAKLDELL ISHVHMLPRG AEDEIPLIKQ 360 DLEEIMAILQ EHDHPGRAED RAMTSKCLTK EVRELSYDME DSVDQYVHAV DTKRRIVPRR 420 KKYKITCRRG KTTARLPEKL KWRIWMANKI REFSVRSQEA LQRYSLFNHP GAHGISTSAT 480 STRHDVCFGS WYPTPCGELV GIDGHLNTLE AWLGKDGEQQ LKVVSVVGSG GVGKTTLSKE 540 LYRRIRGQFE CQAFVRTSRK PDIRRLLISL LSQVRPHQTP HTWKLHSLIA DIRTHLHDKR 600 YLIVIDDVWA TQTWDIINRA LPAGNLCSRI LITTEVEDVA LKCCGYDSRH VLMVKPLGYD 660 DSSKLFFSTA FGLQYECPPE LCDAAHNIVR KCAGSPLAMV TVASLLVSQI GKPEKWDYVN 720 EIFGHGLSTY PSSEGMKQVL NLSYNNLPHY LKACVMYLSI YEEDYIIQKD DLVKQWIAEG 780 LILATEEKDK EEISRRYFDE LISSRMILPV YTNDNDDVLS CTLHHMVLDF IKHKSLEENF 840 VIAIDHSQTT APLADKVRRL SLHFGNAEAT PPTNMRLSQV RTLAFFGVIE CLPSVIEFRL 900 LQVLILHLFG DDESVSFDLT GISELFRLRY LHVTCNATLE VPQTQMRGLQ YLETLKIDAR 960 VSAVPSDIVH LPSLLHLSLP VGTNLPNGID HMTSLCTLEY FDINVNSMEN VHSLGELTNL 1020 QDLRLTCSTV PSSYLKSKID SMGSILANLS NLRSVTLKSS GILESEPYSM IISCDGLSSV 1080 SSPPALLQRF EWLPRICTFS SIPKWISHLN KLCILKIGLR ELVSNDVAAL RGLPALTVLS 1140 LYVRAKPAEK IVFTRAGFLV LKCFKFRCSV PWLEFEVDAM PNLLKLKLSF DAHGVDQHRT 1200 IPVGMVHLTG LKEISAKIWG AGANERRAAK SALIDAIKMH SGCPTSSIQC LDGMFSGKDD 1260 NNSGIQEEEH LTLQKQYNIK EEDSKKQHDL PKDYMDVAYK QTSSSNNHRK SKRITQVRMQ 1320 VRVGSVQDNS ALEDGFSWRK YGQKDIIGSM HPRAYFRCTH RHVKGCPVTK QVQRTSTDPL 1380 LFDVVYHGEH TCLDSVGSPA TSCGHVAGVE VMSRSRPGVG FVSQSQAACS SQVMSSEVVS 1440 GSGSTAGLWG DEIDMPDPDR DDTGISADYL DGYELDVSAF FA

Sequence ? help Back to Top

Protein Sequence Length: 1482 aa Download sequence

MGDSALHLAA RAGNVALVQK IFADCDPELV AELTDHQNQD GETALYVSAE MGHVEVVCEI  60
LKVCDLHSAF LKAHNSFDAF HIAAKQGHLV VLQELLKAFP ALAMTTNSVN ATALYTAALH  120
RHIGIVNLLL DTDPRLARIA RNNGKTALHI AARLGNVEVV VLLLNKDPAT VFRIDRKGQT  180
AVHMASKGHN AEILLELLKP DVSVIHLEDN KGDRPLHVAT RKGKTIIVQT LISIEEIDIN  240
AINGAGETAF AIAEKLGNEE LVNILREAGG VTVEEQVNPP KSIKRFKQTH DVQSQIKQKR  300
RTNMHFHTIR KSSQKLHTEA PVCALADAMF RLPAKLDELL ISHVHMLPRG AEDEIPLIKQ  360
DLEEIMAILQ EHDHPGRAED RAMTSKCLTK EVRELSYDME DSVDQYVHAV DTKRRIVPRR  420
KKYKITCRRG KTTARLPEKL KWRIWMANKI REFSVRSQEA LQRYSLFNHP GAHGISTSAT  480
STRHDVCFGS WYPTPCGELV GIDGHLNTLE AWLGKDGEQQ LKVVSVVGSG GVGKTTLSKE  540
LYRRIRGQFE CQAFVRTSRK PDIRRLLISL LSQVRPHQTP HTWKLHSLIA DIRTHLHDKR  600
YLIVIDDVWA TQTWDIINRA LPAGNLCSRI LITTEVEDVA LKCCGYDSRH VLMVKPLGYD  660
DSSKLFFSTA FGLQYECPPE LCDAAHNIVR KCAGSPLAMV TVASLLVSQI GKPEKWDYVN  720
EIFGHGLSTY PSSEGMKQVL NLSYNNLPHY LKACVMYLSI YEEDYIIQKD DLVKQWIAEG  780
LILATEEKDK EEISRRYFDE LISSRMILPV YTNDNDDVLS CTLHHMVLDF IKHKSLEENF  840
VIAIDHSQTT APLADKVRRL SLHFGNAEAT PPTNMRLSQV RTLAFFGVIE CLPSVIEFRL  900
LQVLILHLFG DDESVSFDLT GISELFRLRY LHVTCNATLE VPQTQMRGLQ YLETLKIDAR  960
VSAVPSDIVH LPSLLHLSLP VGTNLPNGID HMTSLCTLEY FDINVNSMEN VHSLGELTNL  1020
QDLRLTCSTV PSSYLKSKID SMGSILANLS NLRSVTLKSS GILESEPYSM IISCDGLSSV  1080
SSPPALLQRF EWLPRICTFS SIPKWISHLN KLCILKIGLR ELVSNDVAAL RGLPALTVLS  1140
LYVRAKPAEK IVFTRAGFLV LKCFKFRCSV PWLEFEVDAM PNLLKLKLSF DAHGVDQHRT  1200
IPVGMVHLTG LKEISAKIWG AGANERRAAK SALIDAIKMH SGCPTSSIQC LDGMFSGKDD  1260
NNSGIQEEEH LTLQKQYNIK EEDSKKQHDL PKDYMDVAYK QTSSSNNHRK SKRITQVRMQ  1320
VRVGSVQDNS ALEDGFSWRK YGQKDIIGSM HPRAYFRCTH RHVKGCPVTK QVQRTSTDPL  1380
LFDVVYHGEH TCLDSVGSPA TSCGHVAGVE VMSRSRPGVG FVSQSQAACS SQVMSSEVVS  1440
GSGSTAGLWG DEIDMPDPDR DDTGISADYL DGYELDVSAF FA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46400.1	8e-26	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG050380.4