PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG049910.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 381aa MW: 43049.6 Da PI: 6.8611

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG049910.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.3	5.1e-52	17	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +pGfrFhPtdeelv++yLkkk+++k++++ e i+++diyk++PwdLpk ++++e++wyf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s TRIDC5AG049910.9 17 MPGFRFHPTDEELVSFYLKKKIQQKPISI-ELIRQLDIYKFDPWDLPKLASTGETDWYFYCPRDRKYRNSARPNRVTAAGFWKATGTDRPIYS 108 69*************************.89***********88888999*********************************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +glkk+Lvfy+gra +g+ktdW+mhe+rl TRIDC5AG049910.9 109 SeDTRCIGLKKSLVFYRGRAARGVKTDWMMHEFRL 143 866777*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEGINDVNMD KSEEIIMPGF RFHPTDEELV SFYLKKKIQQ KPISIELIRQ LDIYKFDPWD 60 LPKLASTGET DWYFYCPRDR KYRNSARPNR VTAAGFWKAT GTDRPIYSSE DTRCIGLKKS 120 LVFYRGRAAR GVKTDWMMHE FRLPSLTDPS LPKRPIDKNI PLNDSWTICK IFKKTSSMAQ 180 QMVLSHTWGP PLPGTTEQDL FSAMQPMQAS HFASESSSRS LQVAEAPASQ FNSKHGFQGQ 240 QQLQKPSNTQ DGSSCKVISF NCSPSLELEG PTILPFQTQT SQKPVHTAPP LFNMQFGQPE 300 QQITGFLADS SADVNAGMSC RNQESSTMKH GNTFSMNNEL EAPGRLNFPF DLGADSSDDW 360 KCNIPWESFL SPTVPAEMPQ Y

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEGINDVNMD KSEEIIMPGF RFHPTDEELV SFYLKKKIQQ KPISIELIRQ LDIYKFDPWD  60
LPKLASTGET DWYFYCPRDR KYRNSARPNR VTAAGFWKAT GTDRPIYSSE DTRCIGLKKS  120
LVFYRGRAAR GVKTDWMMHE FRLPSLTDPS LPKRPIDKNI PLNDSWTICK IFKKTSSMAQ  180
QMVLSHTWGP PLPGTTEQDL FSAMQPMQAS HFASESSSRS LQVAEAPASQ FNSKHGFQGQ  240
QQLQKPSNTQ DGSSCKVISF NCSPSLELEG PTILPFQTQT SQKPVHTAPP LFNMQFGQPE  300
QQITGFLADS SADVNAGMSC RNQESSTMKH GNTFSMNNEL EAPGRLNFPF DLGADSSDDW  360
KCNIPWESFL SPTVPAEMPQ Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	3e-94	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG049910.9