PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG048160.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 422aa    MW: 46959.5 Da    PI: 6.0668
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG048160.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS419.92.2e-128524211373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d  +++ ++ +l e++s +g+p+qRl  y++e+L arla+s++++y+al+ ++ +    se +++++ ++ v+P+lkf
  TRIDC5AG048160.7  52 LKKLLMSCARAVDEKDSLAIDMTVPELGENVSVSGKPLQRLGEYMVEGLVARLASSGHSIYRALKWQKPH---GSEMISYQRELYAVCPYLKF 141
                       5799*************************************************************99999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       +++ aN aI eav ge+++HiiDf isqG+QW++L+qaLa+Rp+gpp++RiT ++++es   +   le +g+ L+++A+e+g+pfef++l   
  TRIDC5AG048160.7 142 GYVSANGAIAEAVRGEDMIHIIDFRISQGVQWISLIQALAARPGGPPTVRITCIDDSESAyvRGGGLEILGNTLSDIAREFGLPFEFHAL-DI 233
                       ********************************************************99889999*************************6.66 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +++ +e  +L v pgEa+aVn+ l lh+++desvs +++rd++L+lvk+lsPkvv++veqe+++n+++F +rf+e+l+yy+a+f+s++++ pr
  TRIDC5AG048160.7 234 SVSGVEEGHLGVIPGEAVAVNFNLTLHQIPDESVSAANHRDRILRLVKQLSPKVVTIVEQELNTNTGPFTQRFAETLDYYTAIFESIDVERPR 326
                       8999***************************************************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       e +er+k+E+++l+r+ivn+vacegaer+erhe ++kW++rl++aGF+p+pl++++ ++ ++ll+ ++s+ yr+ e++g ++lgWk+r+Lv+ 
  TRIDC5AG048160.7 327 EPKERTKMEQHCLARKIVNIVACEGAERVERHEVFSKWNARLTMAGFRPLPLGSRVKDNLRTLLHYYSSN-YRLAERDGVIYLGWKNRALVVS 418
                       *****************************************************************99977.********************** PP

              GRAS 371 SaW 373
                       SaW
  TRIDC5AG048160.7 419 SAW 421
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
IGHLPCLREI YAKIGGACAD AESALATAIS DEITHDKNEQ DEVVEEDRVG YLKKLLMSCA  60
RAVDEKDSLA IDMTVPELGE NVSVSGKPLQ RLGEYMVEGL VARLASSGHS IYRALKWQKP  120
HGSEMISYQR ELYAVCPYLK FGYVSANGAI AEAVRGEDMI HIIDFRISQG VQWISLIQAL  180
AARPGGPPTV RITCIDDSES AYVRGGGLEI LGNTLSDIAR EFGLPFEFHA LDISVSGVEE  240
GHLGVIPGEA VAVNFNLTLH QIPDESVSAA NHRDRILRLV KQLSPKVVTI VEQELNTNTG  300
PFTQRFAETL DYYTAIFESI DVERPREPKE RTKMEQHCLA RKIVNIVACE GAERVERHEV  360
FSKWNARLTM AGFRPLPLGS RVKDNLRTLL HYYSSNYRLA ERDGVIYLGW KNRALVVSSA  420
WH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-163GRAS family protein