PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG048160.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 994aa    MW: 111074 Da    PI: 7.2249
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG048160.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS416.52.4e-1276249931373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d  +++ ++ +l e++s +g+p+qRl  y++e+L arla+s++++y+al+ ++ +    se +++++ ++ v+P+lkf
  TRIDC5AG048160.3 624 LKKLLMSCARAVDEKDSLAIDMTVPELGENVSVSGKPLQRLGEYMVEGLVARLASSGHSIYRALKWQKPH---GSEMISYQRELYAVCPYLKF 713
                       5799*************************************************************99999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       +++ aN aI eav ge+++HiiDf isqG+QW++L+qaLa+Rp+gpp++RiT ++++es   +   le +g+ L+++A+e+g+pfef++l   
  TRIDC5AG048160.3 714 GYVSANGAIAEAVRGEDMIHIIDFRISQGVQWISLIQALAARPGGPPTVRITCIDDSESAyvRGGGLEILGNTLSDIAREFGLPFEFHAL-DI 805
                       ********************************************************99889999*************************6.66 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +++ +e  +L v pgEa+aVn+ l lh+++desvs +++rd++L+lvk+lsPkvv++veqe+++n+++F +rf+e+l+yy+a+f+s++++ pr
  TRIDC5AG048160.3 806 SVSGVEEGHLGVIPGEAVAVNFNLTLHQIPDESVSAANHRDRILRLVKQLSPKVVTIVEQELNTNTGPFTQRFAETLDYYTAIFESIDVERPR 898
                       8999***************************************************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       e +er+k+E+++l+r+ivn+vacegaer+erhe ++kW++rl++aGF+p+pl++++ ++ ++ll+ ++s+ yr+ e++g ++lgWk+r+Lv+ 
  TRIDC5AG048160.3 899 EPKERTKMEQHCLARKIVNIVACEGAERVERHEVFSKWNARLTMAGFRPLPLGSRVKDNLRTLLHYYSSN-YRLAERDGVIYLGWKNRALVVS 990
                       *****************************************************************99977.********************** PP

              GRAS 371 SaW 373
                       SaW
  TRIDC5AG048160.3 991 SAW 993
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 994 aa     Download sequence    
MEEVALTCCC YHSKHIFEMR PLDHDHSRKL FFNILFGSES DCPKELKEVT NKIVELCGGL  60
PLATISIASL LSSQPVIKMD LLAYLCDSLS SCLWTSPSEG TRQVLNLSYN NLPRYLKICL  120
LCLSMYPKGH TMWKDDLVKQ WVAEGFIHTT GVQDMEKVAA SYFDELIKRR FIQPLCIKYN  180
NEVSSCTIHD VVHDLIADKS KEENFNVVID SSRKNVALSH KVRRLSLLFG DAKYAKTPEN  240
MRRSQVRSLT FFGLFESMPS ISEFKLLRVL SLQLSGYGGR GTINLTGISD LFQLRYLKIA  300
SDICIQLPEH MLGLHCLETL VMDSEATAVP WDIIHLPSLS HLSLLVMTNL LHWLGSMRFV  360
GKLNNLRDLH LTFSVPSSDY LKRSIEALGS LLSGHGNLKT LALVNGLCHR NTVVRGASKV  420
TVSWDGLVPP PLLEVFDWSL RSCILSRIPK WIGKLGELHI LKIAARELAM DGIDALRGLP  480
ALTDLSLYLQ TAAVERIVFD KGGFSVLNYF KLRCSVPCLK FEANSMPNLQ KLKLGFNAPR  540
PLIDQHGAST AISIGHLPCL REIYAKIGGA CADAESALAT AISNHPSNPR ISVQLVDYTF  600
DGDEITHDKN EQDEVVEEDR VGYLKKLLMS CARAVDEKDS LAIDMTVPEL GENVSVSGKP  660
LQRLGEYMVE GLVARLASSG HSIYRALKWQ KPHGSEMISY QRELYAVCPY LKFGYVSANG  720
AIAEAVRGED MIHIIDFRIS QGVQWISLIQ ALAARPGGPP TVRITCIDDS ESAYVRGGGL  780
EILGNTLSDI AREFGLPFEF HALDISVSGV EEGHLGVIPG EAVAVNFNLT LHQIPDESVS  840
AANHRDRILR LVKQLSPKVV TIVEQELNTN TGPFTQRFAE TLDYYTAIFE SIDVERPREP  900
KERTKMEQHC LARKIVNIVA CEGAERVERH EVFSKWNARL TMAGFRPLPL GSRVKDNLRT  960
LLHYYSSNYR LAERDGVIYL GWKNRALVVS SAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-154GRAS family protein