PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG048160.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 684aa    MW: 75821.3 Da    PI: 6.9278
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG048160.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS417.79.8e-1283146831373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cA+av+++d  +++ ++ +l e++s +g+p+qRl  y++e+L arla+s++++y+al+ ++ +    se +++++ ++ v+P+lkf
  TRIDC5AG048160.2 314 LKKLLMSCARAVDEKDSLAIDMTVPELGENVSVSGKPLQRLGEYMVEGLVARLASSGHSIYRALKWQKPH---GSEMISYQRELYAVCPYLKF 403
                       5799*************************************************************99999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       +++ aN aI eav ge+++HiiDf isqG+QW++L+qaLa+Rp+gpp++RiT ++++es   +   le +g+ L+++A+e+g+pfef++l   
  TRIDC5AG048160.2 404 GYVSANGAIAEAVRGEDMIHIIDFRISQGVQWISLIQALAARPGGPPTVRITCIDDSESAyvRGGGLEILGNTLSDIAREFGLPFEFHAL-DI 495
                       ********************************************************99889999*************************6.66 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +++ +e  +L v pgEa+aVn+ l lh+++desvs +++rd++L+lvk+lsPkvv++veqe+++n+++F +rf+e+l+yy+a+f+s++++ pr
  TRIDC5AG048160.2 496 SVSGVEEGHLGVIPGEAVAVNFNLTLHQIPDESVSAANHRDRILRLVKQLSPKVVTIVEQELNTNTGPFTQRFAETLDYYTAIFESIDVERPR 588
                       8999***************************************************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       e +er+k+E+++l+r+ivn+vacegaer+erhe ++kW++rl++aGF+p+pl++++ ++ ++ll+ ++s+ yr+ e++g ++lgWk+r+Lv+ 
  TRIDC5AG048160.2 589 EPKERTKMEQHCLARKIVNIVACEGAERVERHEVFSKWNARLTMAGFRPLPLGSRVKDNLRTLLHYYSSN-YRLAERDGVIYLGWKNRALVVS 680
                       *****************************************************************99977.********************** PP

              GRAS 371 SaW 373
                       SaW
  TRIDC5AG048160.2 681 SAW 683
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 684 aa     Download sequence    
MLGLHCLETL VMDSEATAVP WDIIHLPSLS HLSLLVMTNL LHWLGSMRFV GKLNNLRDLH  60
LTFSVPSSDY LKRSIEALGS LLSGHGNLKT LALVNGLCHR NTVVRGASKV TVSWDGLVPP  120
PLLEVFDWSL RSCILSRIPK WIGKLGELHI LKIAARELAM DGIDALRGLP ALTDLSLYLQ  180
TAAVERIVFD KGGFSVLNYF KLRCSVPCLK FEANSMPNLQ KLKLGFNAPR PLIDQHGAST  240
AISIGHLPCL REIYAKIGGA CADAESALAT AISNHPSNPR ISVQLVDYTF DGDEITHDKN  300
EQDEVVEEDR VGYLKKLLMS CARAVDEKDS LAIDMTVPEL GENVSVSGKP LQRLGEYMVE  360
GLVARLASSG HSIYRALKWQ KPHGSEMISY QRELYAVCPY LKFGYVSANG AIAEAVRGED  420
MIHIIDFRIS QGVQWISLIQ ALAARPGGPP TVRITCIDDS ESAYVRGGGL EILGNTLSDI  480
AREFGLPFEF HALDISVSGV EEGHLGVIPG EAVAVNFNLT LHQIPDESVS AANHRDRILR  540
LVKQLSPKVV TIVEQELNTN TGPFTQRFAE TLDYYTAIFE SIDVERPREP KERTKMEQHC  600
LARKIVNIVA CEGAERVERH EVFSKWNARL TMAGFRPLPL GSRVKDNLRT LLHYYSSNYR  660
LAERDGVIYL GWKNRALVVS SAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-158GRAS family protein