PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG047450.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 208aa MW: 23402.9 Da PI: 8.9173 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.2 | 1.6e-12 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l + g+ +W+++++ g+ R++k+c++rw +yl TRIDC5AG047450.4 14 RGPWTAEEDRKLMAFILGNAGRcCWRAVPKLAGLLRCGKSCRLRWTNYL 62 89*************99998889**********99************97 PP | |||||||
2 | Myb_DNA-binding | 55 | 1.9e-17 | 71 | 112 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T +E+ l vd++++lG++ W++Ia++++ gRt++++k++w+++ TRIDC5AG047450.4 71 LTDDEERLVVDLHAKLGNR-WSKIAAKLP-GRTDNEIKNHWNTH 112 699****************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MGRQPCCDKL GVKRGPWTAE EDRKLMAFIL GNAGRCCWRA VPKLAGLLRC GKSCRLRWTN 60 YLRPDLKRGL LTDDEERLVV DLHAKLGNRW SKIAAKLPGR TDNEIKNHWN THIKKKLIKM 120 GIDPITHVPL EVRKQPQQAS LSTMSAQSST ITIECKSNNG QHPPNLSGTN TDNTTGGSNN 180 IHDQDPLVKW LLEEEDDLPA IGIIEEPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22680.1 | 1e-81 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG047450.4 |