PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG047450.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 287aa MW: 31941 Da PI: 5.4147 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.5 | 2.7e-12 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l + g+ +W+++++ g+ R++k+c++rw +yl TRIDC5AG047450.2 14 RGPWTAEEDRKLMAFILGNAGRcCWRAVPKLAGLLRCGKSCRLRWTNYL 62 89*************99998889**********99************97 PP | |||||||
2 | Myb_DNA-binding | 54.3 | 3.2e-17 | 71 | 112 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T +E+ l vd++++lG++ W++Ia++++ gRt++++k++w+++ TRIDC5AG047450.2 71 LTDDEERLVVDLHAKLGNR-WSKIAAKLP-GRTDNEIKNHWNTH 112 699****************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MGRQPCCDKL GVKRGPWTAE EDRKLMAFIL GNAGRCCWRA VPKLAGLLRC GKSCRLRWTN 60 YLRPDLKRGL LTDDEERLVV DLHAKLGNRW SKIAAKLPGR TDNEIKNHWN THIKKKLIKM 120 GIDPITHVPL EVRKQPQQAS LSTMSAQSST ITIECKSNNG QQCQQQDTHI NRDKDASSVG 180 GESSPPNLSG TNTDNTTGGS NNIHDQDPLV KWLLEEEDDL PAIGIIEEPW LDFIVENDVD 240 KFNGIPSTMS WDIGTTDWLL DYQDFGVGDS TLLDDASMVD SSSGSNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66230.1 | 2e-81 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG047450.2 |