PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG046650.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 396aa MW: 41116.5 Da PI: 4.6326

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG046650.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.4	3e-35	42	133	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y+++ed++++++isw e+g++fvv+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ F++g+k+ll TRIDC5AG046650.1 42 FLTKTYQLVEDPAVDDVISWGEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANDCFRRGEKRLL 125 9***************************************************************99.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+k TRIDC5AG046650.1 126 CDIHRRKV 133 ***985 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MSAEHGAAAA DGAGAEPPPP APMPGLVASA DAAGQRSLPT PFLTKTYQLV EDPAVDDVIS 60 WGEDGSTFVV WRPAEFARDL LPKYFKHNNF SSFVRQLNTY GFRKIVPDRW EFANDCFRRG 120 EKRLLCDIHR RKVVQSAGLA AAAAAAAAGA VTVATAAIPM ALPVTRSGSP EPQLSSEEQV 180 LSSNSGSAEE LPLAAPSGSG SGLGGAAAGS SSGDMGEEND RLRRDNARLT RELGQMKKLC 240 NNIVSLMSKF ASSQQPDGGP GSLSSVVNCS GESALAPPPP LPAGILDLMP SCSALATAAG 300 LAVDGGPDTD ARLFGVSIGL KRARDEEEDG DGGELPNSNG DGADVKPEEA AERRPEGGGS 360 EERQSWPIYR PKPVYRACNG QDGAGSGSDQ DRSNSR

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MSAEHGAAAA DGAGAEPPPP APMPGLVASA DAAGQRSLPT PFLTKTYQLV EDPAVDDVIS  60
WGEDGSTFVV WRPAEFARDL LPKYFKHNNF SSFVRQLNTY GFRKIVPDRW EFANDCFRRG  120
EKRLLCDIHR RKVVQSAGLA AAAAAAAAGA VTVATAAIPM ALPVTRSGSP EPQLSSEEQV  180
LSSNSGSAEE LPLAAPSGSG SGLGGAAAGS SSGDMGEEND RLRRDNARLT RELGQMKKLC  240
NNIVSLMSKF ASSQQPDGGP GSLSSVVNCS GESALAPPPP LPAGILDLMP SCSALATAAG  300
LAVDGGPDTD ARLFGVSIGL KRARDEEEDG DGGELPNSNG DGADVKPEEA AERRPEGGGS  360
EERQSWPIYR PKPVYRACNG QDGAGSGSDQ DRSNSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11660.1	8e-76	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG046650.1