PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046360.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 242aa    MW: 25935.9 Da    PI: 4.684
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046360.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-1660108151
               AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaark 51 
                       + y+GVr++ + grWv+e+r+p   g +  r +lg+f+tae Aa+a +a ++
  TRIDC5AG046360.2  60 PVYRGVRRRGNAGRWVCEVRVP---GrRGSRLWLGTFDTAEAAARANDAVML 108
                       68*******************9...6455*****************999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MCPIKREMSG ESGSPSPCSG ENFCSPSASP ERQQARQAGW TSAPAKRPAG RTKFRETRHP  60
VYRGVRRRGN AGRWVCEVRV PGRRGSRLWL GTFDTAEAAA RANDAVMLML AAGGAACLNF  120
ADSAELLSVP VASSYRSLDE VRHAVVEAVE DLLRREALAE EDALSGTSSS APSPLTDDES  180
SSSPLPEEDS PFEQDVLSEM GWDLYYASLA QAMLMAPPAA AAALGDYGEA HLADVPLWSY  240
QS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.14e-24ERF family protein