PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046330.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 253aa    MW: 26653.4 Da    PI: 4.4185
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046330.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.32.1e-1453105155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++ +  rWv+e+r+p ++g  +r +lg++ tae Aa+  +aa+++l g
  TRIDC5AG046330.2  53 PVYRGVRRRGNAERWVCEVRVPGKRG--ARLWLGTYATAEIAARGNDAAMLALGG 105
                       68*******************95544..**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
PSTQPAAMDM GLEVSSSSPS SSSASSSPEH AAGRASLAKR PAGRTKFRET RHPVYRGVRR  60
RGNAERWVCE VRVPGKRGAR LWLGTYATAE IAARGNDAAM LALGGRSAAC LNFADSAWLL  120
AVPPALADLG DVRRAAVEAV ADFQRREAAN GSLTVTATVT EEASCGAPEE SSSESDSVGS  180
SETSEPSADG EFEVPVAVDT DMFRLDLFPE LDLCSYYASL AEALLLDPPA PVTTTYAYWD  240
NGDGGADVAL WSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.15e-36ERF family protein