PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046300.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 251aa    MW: 26224.1 Da    PI: 6.3426
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046300.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-1753105155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + ++GVr++ ++grWv+e+r+p ++g   r +lg++ tae Aa+a++aa+++l+g
  TRIDC5AG046300.2  53 PVFHGVRRRGSNGRWVCEVRVPGKRG--ERLWLGTHVTAEAAARAHDAAMLALYG 105
                       5799*****************95544..************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
LLGGAAMDTG PERNWNSPAS PPSSLEQGMP TSPASPTPKR PAGRTKFKET RHPVFHGVRR  60
RGSNGRWVCE VRVPGKRGER LWLGTHVTAE AAARAHDAAM LALYGRTPAA RLNYPDSAWL  120
LAVPSSLSDL ADVRRAAIGA VVDFLRRQEA GASAGAVAEE AHVDGIASAA SAPDNASSSA  180
AAAHSQPPCA NAGYEVPDAL CHDMFELHTS GEMDAGTYYA DLAQGLLLEP PPPPSSGASS  240
EHGDDAALWN H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.14e-25ERF family protein