PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG046160.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 275aa    MW: 29235.4 Da    PI: 7.6025
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG046160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.89.7e-174192255
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr++ + g+Wv+e+r+p   g k  r +lg+f tae+Aa+a++aa ++l g
  TRIDC5AG046160.1 41 LYRGVRQRGRVGQWVCEVRVP---GvKGSRLWLGTFATAEMAARAHDAAVLALSG 92
                      69******************9...8777*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDVADAASSS GQEQQGHRTV SSEPPKRPAG RTKVHETRHP LYRGVRQRGR VGQWVCEVRV  60
PGVKGSRLWL GTFATAEMAA RAHDAAVLAL SGRAACLNFA DSAWRMLPVL AAGSFGFGSA  120
REIKAAVAVA VVAFQKEQII PVAVAVVALQ KEQIIPVAVA VVALQKQQIP VAVALVALQE  180
QQVPVAVAVV ALHRQQVPVA CPATSGPGSA LFYMSSSDLL ELDEEQWFGG MEAGSYYASL  240
AQGMLVAPPD ERARPEDGEQ SGVQTPLWSQ SHLFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.18e-25ERF family protein