PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG046050.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 305aa MW: 31104.8 Da PI: 5.0843

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG046050.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	105.1	1.1e-32	34	115	6	88
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 r+ ++hTkv+gR+RR+R+ a+caar+ +L++eLG+++d+ ti WLlqq++pai ++tgt++ +a ++ +++ + ++s++ TRIDC5AG046050.2 34 PRNRDRHTKVEGRGRRIRMAAPCAARVAQLTRELGHKTDGDTIRWLLQQSEPAIVAATGTGTVPAIAT-TVDGVLRIPTESAS 115 6899********************************************************99998444.34444443333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
AIAVVPAAAH GPIVPKPEQA PGEFLGGLAV ALPPRNRDRH TKVEGRGRRI RMAAPCAARV 60 AQLTRELGHK TDGDTIRWLL QQSEPAIVAA TGTGTVPAIA TTVDGVLRIP TESASAAGAD 120 GAGPASKRRK LQPTRAAGGA GPLVAAPPAA YYPAAADPLL QGNGAISVSS GLAPVSAAAA 180 PAGGGIPFFT IRVPASGDGK QMVSPAGMWM LQQPPAAGGA PNQPMQYWPF PPNPAEFNNF 240 PGAQAINVAN YQQQPCYSPM QFVAAGGEPQ DQQQADGRSE GADGQTQGLE DDYDGEALTD 300 SSSEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	3e-37	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG046050.2