PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG045800.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 1072aa MW: 119543 Da PI: 4.88

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG045800.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.9	1.1e-13	21	66	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l TRIDC5AG045800.2 21 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 66 78***************************.**********986 PP
2	Myb_DNA-binding	32.7	1.8e-10	73	116	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l TRIDC5AG045800.2 73 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 116 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1072 aa Download sequence
VQEAPRGSKG AGKMRIMIKG GVWKNTEDEI LKAAVMKYGK NQWARISSLL VRKSAKQCKA 60 RWYEWLDPSI KKTEWTREED EKLLHLAKLM PTQWRTIAPI VGRTPSQCLE RYEKLLDAAC 120 AKDENYEPND DPRKLRPGEI DPNPESKPAR PDPVDMDEDE KEMLSEARAR LANTRGKKAK 180 RKAREKQLEE ARRLASLQKR RELKAAGIDN RHKKRKRKGI DYNAEIPFEK RPPPGFYDTV 240 GEDRPLEHVQ FPTTIEELEG RRRVDVEAQL RKQDIAKNKI LQRQDAPAAI MQANKLNDPE 300 AVTRRSKLML PPPQISDHEL EEIAKMGNAG DPALAEELGE GSTATRTLLA NYSQTPRLGM 360 TPLRTPQRTP GGKGDAIMME AENLARLRES QTPLLGGDNP ELHPSDFSGV TPRKKEIQTP 420 NPMATPLASP GPGVTPRIGL TPSRDGNSFG LTPKGTPFRD ELHINEEVEM QDSAQLELRR 480 QAELRRGLRS GFASIPQPKN EYQIVMPSIT EEKEEAEERI EEDMSDRLAR ERAEEQARQE 540 ALLRKRSKVL QRSLPRPPAA SVEILRQSLI KGGESRSTFV PPTSLEQADE LINEELLRLL 600 EHDNAKYPLD EQTQREKKKG SKRQTNGPAF VPEIEGFDEH ELKEASSMVE EEIQYLRVAM 660 GHENESFEDF VKSHDACQED LMFFPANNSY GLASVAGNAD KISALQHEFE MVKKRMDDEA 720 KKASRLEQKI KLLTQGYQAR AAKLGSQIQD TFKQMNTAAT ELECFQELQK QEQMAGAYRV 780 RNLSEEVNKQ KALEQTLQSR YGDLLSGYQS IHEQLEEHKR LLKLREEAIE AEKRAKEEAI 840 EAENRAKEAA LEAENRAKEE AIEAENRAKE ALEAETRAKE EEAAARNRAA EEENERKNHD 900 IEEESGKMTT ITDEEAAGSK GDQMDMDNAD VAGELVGPIP PLPDTQVDND GASIEQSTSN 960 AQSGDTVTVN EGAIDKVNSS KLDGQDNTSC SMDIDAGSQE EGKNVLAAAA TSVDVGNTPV 1020 SSDQAVSNEG SDAVHAPVSS DQAVSNEGSD AVHAPVSLDQ AAPNEESGAV PE

Sequence ? help Back to Top

Protein Sequence Length: 1072 aa Download sequence

VQEAPRGSKG AGKMRIMIKG GVWKNTEDEI LKAAVMKYGK NQWARISSLL VRKSAKQCKA  60
RWYEWLDPSI KKTEWTREED EKLLHLAKLM PTQWRTIAPI VGRTPSQCLE RYEKLLDAAC  120
AKDENYEPND DPRKLRPGEI DPNPESKPAR PDPVDMDEDE KEMLSEARAR LANTRGKKAK  180
RKAREKQLEE ARRLASLQKR RELKAAGIDN RHKKRKRKGI DYNAEIPFEK RPPPGFYDTV  240
GEDRPLEHVQ FPTTIEELEG RRRVDVEAQL RKQDIAKNKI LQRQDAPAAI MQANKLNDPE  300
AVTRRSKLML PPPQISDHEL EEIAKMGNAG DPALAEELGE GSTATRTLLA NYSQTPRLGM  360
TPLRTPQRTP GGKGDAIMME AENLARLRES QTPLLGGDNP ELHPSDFSGV TPRKKEIQTP  420
NPMATPLASP GPGVTPRIGL TPSRDGNSFG LTPKGTPFRD ELHINEEVEM QDSAQLELRR  480
QAELRRGLRS GFASIPQPKN EYQIVMPSIT EEKEEAEERI EEDMSDRLAR ERAEEQARQE  540
ALLRKRSKVL QRSLPRPPAA SVEILRQSLI KGGESRSTFV PPTSLEQADE LINEELLRLL  600
EHDNAKYPLD EQTQREKKKG SKRQTNGPAF VPEIEGFDEH ELKEASSMVE EEIQYLRVAM  660
GHENESFEDF VKSHDACQED LMFFPANNSY GLASVAGNAD KISALQHEFE MVKKRMDDEA  720
KKASRLEQKI KLLTQGYQAR AAKLGSQIQD TFKQMNTAAT ELECFQELQK QEQMAGAYRV  780
RNLSEEVNKQ KALEQTLQSR YGDLLSGYQS IHEQLEEHKR LLKLREEAIE AEKRAKEEAI  840
EAENRAKEAA LEAENRAKEE AIEAENRAKE ALEAETRAKE EEAAARNRAA EEENERKNHD  900
IEEESGKMTT ITDEEAAGSK GDQMDMDNAD VAGELVGPIP PLPDTQVDND GASIEQSTSN  960
AQSGDTVTVN EGAIDKVNSS KLDGQDNTSC SMDIDAGSQE EGKNVLAAAA TSVDVGNTPV  1020
SSDQAVSNEG SDAVHAPVSS DQAVSNEGSD AVHAPVSLDQ AAPNEESGAV PE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	216	KKAKRKAREKQLEEARRLASLQKRRELKAAGIDNRHKKRK
2	199	218	KRRELKAAGIDNRHKKRKRK
3	213	218	KKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG045800.2