PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG045680.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 279aa MW: 29818.4 Da PI: 6.3124 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.1 | 1.3e-12 | 108 | 153 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RRd++N +f Lr +P+ +++Ka+ L A YI +L TRIDC5AG045680.2 108 SHVEAERQRRDKLNRRFCDLRAAVPTV-----SRMDKASLLADAAAYIAEL 153 89************************6.....49**************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MDDELLSPCS SFFPVSPPSG QYEHHHHQFI EFTSCEVPEQ WLLGDVVVPA KSEDTGDLWP 60 AGSLLSPDSE LSELPAASLP GSTESTPRPA AKRRGRKPGP RPEGPTVSHV EAERQRRDKL 120 NRRFCDLRAA VPTVSRMDKA SLLADAAAYI AELRARVARL EDESKQAAAA RWDTNSASLG 180 GGGASIQNFL AGDETVEVRM VGRDAAAVRV ATAAGSAPHA PARLMSALRS LELQVQHACV 240 SRVQGATVQD VVVDVPAALQ HNDGAALRSA LLQRLRDSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32640.1 | 2e-11 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG045680.2 |