PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG043900.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 197aa MW: 21729.4 Da PI: 6.684 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.2 | 7.9e-10 | 116 | 163 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ Er RR+ri +++ L++l+P + +k Ka iL + ++Y++sLq TRIDC5AG043900.10 116 SHSLSERVRRERISERMRMLQSLVPGC----DKVTGKALILDEIINYVQSLQ 163 799***********************9....555*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MEGFSHLPQQ MEYGLTNAGS FLLCHGNPED APAAAAASRE GSSVVLDTPL VATASVEKKR 60 KPKEDTTSLN SAHSKETKES TRKRGGKKQG KEMDDDEEEP KGYIHVRARR GQATDSHSLS 120 ERVRRERISE RMRMLQSLVP GCDKVTGKAL ILDEIINYVQ SLQNQVEFLS MRIASLSPVV 180 YGFGMESEAA FSDQSQV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 58 | 91 | KKRKPKEDTTSLNSAHSKETKESTRKRGGKKQGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 1e-38 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG043900.10 |