PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG043630.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 633aa    MW: 70330.1 Da    PI: 10.1657
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG043630.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.85e-0859103246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       ++WT+ E+++l+  v++ G+++W  Ia  +g+ Rt+ qc  r+q 
  TRIDC5AG043630.3  59 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 103
                       68*****************************99**********96 PP
2Myb_DNA-binding45.71.5e-14112156248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                        +WT+eEd++lv av+ +G + W ++++ +  gR ++qc +rw+k l
  TRIDC5AG043630.3 112 RAWTKEEDLQLVAAVQTFGCN-WQLVSASLV-GRIGNQCSNRWRKTL 156
                       68*****************88.*********.************975 PP
3Myb_DNA-binding43.76.5e-14164209248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       grW+++Ed++l+  vk + +g+W++Ia+ ++ gRt  qc +rw+++l
  TRIDC5AG043630.3 164 GRWSEDEDKRLLVSVKFFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 209
                       8******************************.************986 PP
4Myb_DNA-binding34.45.1e-11216259246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g W +eEd +l+  v++ G+  W++Ia  m  +Rt+++c  rw  
  TRIDC5AG043630.3 216 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 259
                       79*****************88.*****99999***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    
MAYALTNTVG NFEATPEILR SVLPLVNWDY IAAMYLPGRS GAECESRWLN HDDPRINHNA  60
WTACEEKRLI LTVQEKGMHN WINIAVALGT QRTPFQCLAR YQRSLNPHIL KRAWTKEEDL  120
QLVAAVQTFG CNWQLVSASL VGRIGNQCSN RWRKTLIPER KRVGRWSEDE DKRLLVSVKF  180
FRSGSWNKIA QFVPGRTQSQ CSERWRNVLD PDIDHGEWRP EEDSKLLASV HEVGPCWSKI  240
AGAMIPHRTD NMCLRRWKRL CQDELPLIVA ANQVKKSIFQ NNFVDRETER PAICPSDFPS  300
LVYSKVDRGD ESTVSDQVKK PQKRSRKSRV DNVPPNDPSK SSAAAAAVNI TKRKSRKKLS  360
GSGAENQTGE DVTVSDGVNN SSRGHSKARK RKVTTDGDVV VQKRMRGSIS VDNELTLDMF  420
GGPISFNNEA LTNQKRDPTS VGKEGTAKKR TRGTVSVGNE GAVKKKMRGS ISVGEGRAVK  480
NRMRGSVSID NQGNTTKRKR VSRKSAKGNS TTDGGVNACE LDLPSMPSET SAERHIDTGN  540
TNKMNRKSTP RPKQINMAEG TVDEYSRLAD CISFARGNGA SKNNSAMPLN NAIQSDGPSG  600
ENLQVAISAR LDPTYVEQLT EDSSCQLGTN DNH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1318324VKKPQKR
2447453AKKRTRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.21e-105MYB family protein