PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG043630.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 851aa MW: 95141.5 Da PI: 10.1118 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.3 | 7.2e-08 | 279 | 323 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT+ E+++l+ v++ G+++W Ia +g+ Rt+ qc r+q TRIDC5AG043630.2 279 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 323 68*****************************99**********96 PP | |||||||
2 | Myb_DNA-binding | 45.2 | 2.2e-14 | 332 | 376 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd++lv av+ +G + W ++++ + gR ++qc +rw+k l TRIDC5AG043630.2 332 RAWTKEEDLQLVAAVQTFGCN-WQLVSASLV-GRIGNQCSNRWRKTL 376 68*****************88.*********.************975 PP | |||||||
3 | Myb_DNA-binding | 43.2 | 9.4e-14 | 384 | 429 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 grW+++Ed++l+ vk + +g+W++Ia+ ++ gRt qc +rw+++l TRIDC5AG043630.2 384 GRWSEDEDKRLLVSVKFFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 429 8******************************.************986 PP | |||||||
4 | Myb_DNA-binding | 33.9 | 7.4e-11 | 436 | 479 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g W +eEd +l+ v++ G+ W++Ia m +Rt+++c rw TRIDC5AG043630.2 436 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 479 79*****************88.*****99999***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 851 aa Download sequence |
EDDDLETLRA IQRRFSHYHS GTSTGPLENM KNEASKGGDD EFIAHRPGEE DVQKKDTNAN 60 TQTGFPKAAL LLVDALKKNR ACQKFIRRKM INIEAKIEVN KDLRDRVKCL MDYQLSCRRS 120 FGKVLCQKVD PRVRLISSQK QSAQSAKNKY KISALLLGPA ENPHVEKYKA VLKQFPVSLQ 180 KHPWSDVEKD RLAKGIKQQY QETLIKDSLK NGSGDFSAVD MAYALTNTVG NFEATPEILR 240 SVLPLVNWDY IAAMYLPGRS GAECESRWLN HDDPRINHNA WTACEEKRLI LTVQEKGMHN 300 WINIAVALGT QRTPFQCLAR YQRSLNPHIL KRAWTKEEDL QLVAAVQTFG CNWQLVSASL 360 VGRIGNQCSN RWRKTLIPER KRVGRWSEDE DKRLLVSVKF FRSGSWNKIA QFVPGRTQSQ 420 CSERWRNVLD PDIDHGEWRP EEDSKLLASV HEVGPCWSKI AGAMIPHRTD NMCLRRWKRL 480 CQDELPLIVA ANQVKKSIFQ NNFVDRETER PAICPSDFPS LVYSKVDRGD ESTVSDQVKK 540 PQKRSRKSRV DNVPPNDPSK SSAAAAAVNI TKRKSRKKLS GSGAENQTGE DVTVSDGVNN 600 SSRGHSKARK RKVTTDGDVV VQKRMRGSIS VDNELTLDMF GGPISFNNEA LTNQKRDPTS 660 VGKEGTAKKR TRGTVSVGNE GAVKKKMRGS ISVGEGRAVK NRMRGSVSID NQGNTTKRKR 720 VSRKSAKGNS TTDGGVNACE LDLPSMPSET SAERHIDTGN TNKMNRKSTP RPKQINMAEG 780 TVDEYSRLAD CISFARGNGA SKNNSAMPLN NAIQSDGPSG ENLQVAISAR LDPTYVEQLT 840 EDSSCQLDDN H |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 538 | 544 | VKKPQKR |
2 | 667 | 673 | AKKRTRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.1 | 1e-148 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG043630.2 |