PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG043630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 858aa MW: 95866.2 Da PI: 10.0796 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.3 | 7.3e-08 | 286 | 330 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WT+ E+++l+ v++ G+++W Ia +g+ Rt+ qc r+q TRIDC5AG043630.1 286 NAWTACEEKRLILTVQEKGMHNWINIAVALGTQRTPFQCLARYQR 330 68*****************************99**********96 PP | |||||||
2 | Myb_DNA-binding | 45.2 | 2.2e-14 | 339 | 383 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd++lv av+ +G + W ++++ + gR ++qc +rw+k l TRIDC5AG043630.1 339 RAWTKEEDLQLVAAVQTFGCN-WQLVSASLV-GRIGNQCSNRWRKTL 383 68*****************88.*********.************975 PP | |||||||
3 | Myb_DNA-binding | 43.1 | 9.5e-14 | 391 | 436 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 grW+++Ed++l+ vk + +g+W++Ia+ ++ gRt qc +rw+++l TRIDC5AG043630.1 391 GRWSEDEDKRLLVSVKFFRSGSWNKIAQFVP-GRTQSQCSERWRNVL 436 8******************************.************986 PP | |||||||
4 | Myb_DNA-binding | 33.9 | 7.5e-11 | 443 | 486 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g W +eEd +l+ v++ G+ W++Ia m +Rt+++c rw TRIDC5AG043630.1 443 GEWRPEEDSKLLASVHEVGPC-WSKIAGAMIPHRTDNMCLRRWKR 486 79*****************88.*****99999***********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 858 aa Download sequence |
AWPPSDAEDD DLETLRAIQR RFSHYHSGTS TGPLENMKNE ASKGGDDEFI AHRPGEEDVQ 60 KKDTNANTQT GFPKAALLLV DALKKNRACQ KFIRRKMINI EAKIEVNKDL RDRVKCLMDY 120 QLSCRRSFGK VLCQKVDPRV RLISSQKQSA QSAKNKYKIS ALLLGPAENP HVEKYKAVLK 180 QFPVSLQKHP WSDVEKDRLA KGIKQQYQET LIKDSLKNGS GDFSAVDMAY ALTNTVGNFE 240 ATPEILRSVL PLVNWDYIAA MYLPGRSGAE CESRWLNHDD PRINHNAWTA CEEKRLILTV 300 QEKGMHNWIN IAVALGTQRT PFQCLARYQR SLNPHILKRA WTKEEDLQLV AAVQTFGCNW 360 QLVSASLVGR IGNQCSNRWR KTLIPERKRV GRWSEDEDKR LLVSVKFFRS GSWNKIAQFV 420 PGRTQSQCSE RWRNVLDPDI DHGEWRPEED SKLLASVHEV GPCWSKIAGA MIPHRTDNMC 480 LRRWKRLCQD ELPLIVAANQ VKKSIFQNNF VDRETERPAI CPSDFPSLVY SKVDRGDEST 540 VSDQVKKPQK RSRKSRVDNV PPNDPSKSSA AAAAVNITKR KSRKKLSGSG AENQTGEDVT 600 VSDGVNNSSR GHSKARKRKV TTDGDVVVQK RMRGSISVDN ELTLDMFGGP ISFNNEALTN 660 QKRDPTSVGK EGTAKKRTRG TVSVGNEGAV KKKMRGSISV GEGRAVKNRM RGSVSIDNQG 720 NTTKRKRVSR KSAKGNSTTD GGVNACELDL PSMPSETSAE RHIDTGNTNK MNRKSTPRPK 780 QINMAEGTVD EYSRLADCIS FARGNGASKN NSAMPLNNAI QSDGPSGENL QVAISARLDP 840 TYVEQLTEDS SCQLDDNH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 545 | 551 | VKKPQKR |
2 | 674 | 680 | AKKRTRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.1 | 1e-149 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG043630.1 |