PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG041960.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 268aa    MW: 29341.8 Da    PI: 5.1986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG041960.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.3e-0888135455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i  ++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC5AG041960.5  88 SHSLAERVRREKITLKMKMLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 135
                       8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
KETASCFAKQ MGEPTGPDSK KCKIEDETVR PKVEEEAATA TASDGSAGGE RGRKQAKGKG  60
SKSKQPAADE PPRDYVHVRA RRGQATDSHS LAERVRREKI TLKMKMLQDL VPGCNKVIGK  120
ALMLDEIINY VQSLQQQVEF LSMKLSTVNP QLDFDTLSNL LHKDMNQALG PSASTVFPLE  180
SAGTVYPLCD QADLYQSFSS GAMENQCSMG LLDMALPPAP QYPFQKQQQD FWEASAQNGL  240
HMDHEQSQEN AGSAPNFDGQ LQAADHPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.13e-53bHLH family protein