PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG041100.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 698aa MW: 76701.3 Da PI: 4.4319

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG041100.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	144.6	5.4e-45	11	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 ppGfrF+Ptdeelv ++Lk++v++ + + i++vd+yk++P++Lp+ ++++++k+w+f s+ d+ky++g+r++r+t++gyWkatgkd+++ TRIDC5AG041100.3 11 PPGFRFSPTDEELVLFFLKRRVAAGRPSP--YIADVDVYKSHPSHLPErsALRTGDKQWFFCSRLDRKYPNGSRASRTTADGYWKATGKDRSI 101 8*******************9999655..6**********94357788999******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ g++vg kktLv+++grap+ge+tdWvmhey++ TRIDC5AG041100.3 102 CN-AGRAVGNKKTLVYHHGRAPRGERTDWVMHEYTI 136 .999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
METPPPPPRW PPGFRFSPTD EELVLFFLKR RVAAGRPSPY IADVDVYKSH PSHLPERSAL 60 RTGDKQWFFC SRLDRKYPNG SRASRTTADG YWKATGKDRS ICNAGRAVGN KKTLVYHHGR 120 APRGERTDWV MHEYTILADA LPPPARGRES YALYKLFEKS GVGPKNGEQY GAPFREEDWL 180 DDDDDCEPPA DPIPIAVSLP TRTVTVVEQI GDVLTIGDLE VFLLQNGDDQ GNSEPQSDFS 240 TPVSSQAPLQ HGHPQGRPSD DGNTSEVADA TTSSRGMVMA ENTCTELPFG DLEGLLMEIS 300 DDQRATKSFQ EFSEFVPQLQ LQHDDHEHEA WPNANMEEIS VADYTTSNGV VDASGCTVTE 360 LPYEDIEGLL LQLENDQGNV QPLADFSTPV PRHEFHQVGS GDFHGCHGAT FSSIDPSSAV 420 QENRDLDPRS DPSNQITQSA LTNMPLNWET DCTEETSAMR SVSGLASYDG QDADEEFLEI 480 NDFLDPEDVG QQSMNCTATE HLISSSNGMF DSLEFADASM FLPGSFDTAG VATENQFGYL 540 GDSGSQNQGL QYTSESWTHN QVALNVRNHM NHNHVVFSHA SGTANFHTVN EQPHNLSPAD 600 SQSWFNSAVS ALLDAVPANP ALAAENNVLN RTLQRISSFR SEQAPKEEAS APVIQVRRRR 660 AGLISVSLLV LLAAILWTFA AGTGYAIKFC KGLWKSST

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

METPPPPPRW PPGFRFSPTD EELVLFFLKR RVAAGRPSPY IADVDVYKSH PSHLPERSAL  60
RTGDKQWFFC SRLDRKYPNG SRASRTTADG YWKATGKDRS ICNAGRAVGN KKTLVYHHGR  120
APRGERTDWV MHEYTILADA LPPPARGRES YALYKLFEKS GVGPKNGEQY GAPFREEDWL  180
DDDDDCEPPA DPIPIAVSLP TRTVTVVEQI GDVLTIGDLE VFLLQNGDDQ GNSEPQSDFS  240
TPVSSQAPLQ HGHPQGRPSD DGNTSEVADA TTSSRGMVMA ENTCTELPFG DLEGLLMEIS  300
DDQRATKSFQ EFSEFVPQLQ LQHDDHEHEA WPNANMEEIS VADYTTSNGV VDASGCTVTE  360
LPYEDIEGLL LQLENDQGNV QPLADFSTPV PRHEFHQVGS GDFHGCHGAT FSSIDPSSAV  420
QENRDLDPRS DPSNQITQSA LTNMPLNWET DCTEETSAMR SVSGLASYDG QDADEEFLEI  480
NDFLDPEDVG QQSMNCTATE HLISSSNGMF DSLEFADASM FLPGSFDTAG VATENQFGYL  540
GDSGSQNQGL QYTSESWTHN QVALNVRNHM NHNHVVFSHA SGTANFHTVN EQPHNLSPAD  600
SQSWFNSAVS ALLDAVPANP ALAAENNVLN RTLQRISSFR SEQAPKEEAS APVIQVRRRR  660
AGLISVSLLV LLAAILWTFA AGTGYAIKFC KGLWKSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34180.1	6e-60	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG041100.3