PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC5AG040410.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 677aa MW: 73267.7 Da PI: 6.4371

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG040410.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103	1.7e-32	278	334	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+se+prsYY+Ct+++Cpvkkkvers+ d++++ei+Y+++Hnh+ TRIDC5AG040410.3 278 EDGYNWRKYGQKQVKSSEHPRSYYKCTHPDCPVKKKVERSQ-DGQITEIVYKSSHNHP 334 8**************************************.*************7 PP
2	WRKY	104	8.1e-33	490	548	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d k v++tYeg+Hnhe TRIDC5AG040410.3 490 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHQGCSVRKHVERASHDLKSVITTYEGKHNHE 548 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MAGTSDRGSL MEDWMAMPPT PSPRTLLSSF LNEDFGSGQF SNFFGEHVSN KPHDQSEKRG 60 ELVGFREQLP TQSATDTATP QKDFSLQPNS FNANQKSNPQ GSLAERRASR AGFSIPKIDT 120 SRVGSSTVIR SPIAIPPGLS PTTLLESPVF LYNAMAQPSP TTGKLFVAPE ANSTMPPDST 180 FSNDVFSFQP HSGPASYSNM EKGYNVCHQN QSLSNIHQQG SSLQSSFTAA KDSADETIVK 240 PKTSDSVFSD NHSSEEQEDD EGDQNEEYSS ATNSNPAEDG YNWRKYGQKQ VKSSEHPRSY 300 YKCTHPDCPV KKKVERSQDG QITEIVYKSS HNHPLPPPNR RSGIPLSQIN DQQVHVLEKP 360 GSHAGLNTAS LWENGKSECI QDMQGVEGRP AAGPPVSAYG DTSIMESQDA ADVSSTLSNE 420 IDRATQGTIS LDCDVGEDET ESKRRKLDAL AAVTIPTATT TSSIDMVAAA SRAVREPRVV 480 VQTTSEVDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTHQG CSVRKHVERA SHDLKSVITT 540 YEGKHNHEVP AARNSGNAGS GSGSATASAP QANLSHRRQE QAQGSYPQFG GATPFGSFGL 600 PPRGHLGAAG NFHFGMAPPG MSMPPMPAAH HPSMMQGYQG LMMQEGQMKA EPDQQSGFAA 660 SSAYQQMMGR PPFGPQM

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MAGTSDRGSL MEDWMAMPPT PSPRTLLSSF LNEDFGSGQF SNFFGEHVSN KPHDQSEKRG  60
ELVGFREQLP TQSATDTATP QKDFSLQPNS FNANQKSNPQ GSLAERRASR AGFSIPKIDT  120
SRVGSSTVIR SPIAIPPGLS PTTLLESPVF LYNAMAQPSP TTGKLFVAPE ANSTMPPDST  180
FSNDVFSFQP HSGPASYSNM EKGYNVCHQN QSLSNIHQQG SSLQSSFTAA KDSADETIVK  240
PKTSDSVFSD NHSSEEQEDD EGDQNEEYSS ATNSNPAEDG YNWRKYGQKQ VKSSEHPRSY  300
YKCTHPDCPV KKKVERSQDG QITEIVYKSS HNHPLPPPNR RSGIPLSQIN DQQVHVLEKP  360
GSHAGLNTAS LWENGKSECI QDMQGVEGRP AAGPPVSAYG DTSIMESQDA ADVSSTLSNE  420
IDRATQGTIS LDCDVGEDET ESKRRKLDAL AAVTIPTATT TSSIDMVAAA SRAVREPRVV  480
VQTTSEVDIL DDGYRWRKYG QKVVKGNPNP RSYYKCTHQG CSVRKHVERA SHDLKSVITT  540
YEGKHNHEVP AARNSGNAGS GSGSATASAP QANLSHRRQE QAQGSYPQFG GATPFGSFGL  600
PPRGHLGAAG NFHFGMAPPG MSMPPMPAAH HPSMMQGYQG LMMQEGQMKA EPDQQSGFAA  660
SSAYQQMMGR PPFGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-114	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG040410.3