PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG039280.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 338aa    MW: 36863.9 Da    PI: 6.9563
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG039280.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH54.91.6e-1753102255
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       + +h++ E+rRR++iN++f+ Lr+llP+     ++K +Ka+ L +++eYI+ Lq
  TRIDC5AG039280.3  53 KSKHSATEQRRRSKINDRFQILRDLLPHT----DQKRDKATFLLEVIEYIRFLQ 102
                       578*************************8....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
AAVVVKPEPP AFVLWGQPTA SQPPRAQELA VRVDAKGGSC SGSGTDQLPN TPKSKHSATE  60
QRRRSKINDR FQILRDLLPH TDQKRDKATF LLEVIEYIRF LQEKAQKYEA SFPEWNQENA  120
KLLPWSNMYF RSSWKNAQSK GQIAEDASPD PSQFIRNGAS PGFNITGKLD DNHTAVASAA  180
ISGAPDQAET DHMASVSCRS ADTPTNIMNN VSPQSQPQWA DPSGVDDCAV NSGLLNNQQL  240
MIDEGTISVS SQYSQELLNT LTHALQSSGI DLSQANISVQ INLGKRAVKR PTAGQSSSFK  300
EHTDLGPTNN MMGHQQAMLG NATEELPHAT KRYKPGNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.17e-63bHLH family protein