PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG039180.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 329aa    MW: 34652.6 Da    PI: 7.718
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG039180.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.8e-10150198355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  TRIDC5AG039180.3 150 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 198
                       58*************************9....556*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
SSCFVGPGSG GGMMGAGAFG GAGDQHMGSA FGEGYLDHRR KEGGDKAEPE LAGSGGVPSS  60
EAAGGDCSSK GSDSKKRRRP SEVMGGDQVQ SSNVAADSAN ESAQSKDKGE ESSPATGTTT  120
GGKSKGKGAK ESSEKEDYIH VRARRGQATN SHSLAERLRR EKISERMKLL QDLVPGCSKV  180
TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPRLDLNIE GLLSKDLLRF PGVSSSSMGF  240
SPEMMHPQLQ LSQPGLMQGG AAAMANSDVF RRIMQAQLGA KDGSHSQMAH ALNGPFSDHV  300
AQMAYPSMGS SHSHSQDLSI RPSQDAYQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-56bHLH family protein