PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG039080.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 882aa MW: 95270.5 Da PI: 4.3123

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG039080.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.3e-05	115	137	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ +F ++s +++H+ + H TRIDC5AG039080.7 115 ECKKCNLTFEDQSAYVQHQLSfH 137 5******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 882 aa Download sequence
LSSSTSPQTL TTTWVADQGP RGHQFATCRE VSSYFMSLLG YVEAKPTTVQ NNDVEVRDLS 60 AVNTAGLHQQ NDSTGDMQSA VSATSVTLPI HNGDSQGQRQ KPYKDEAPIE AVRKECKKCN 120 LTFEDQSAYV QHQLSFHQRK AKRRKVDKSV GLGVGKDGKL ETQESQRTCE DKPGYFDHGV 180 ADVKSQGQSP AELFGGASSG DVGAQLSLAA APCGLQEITG LPEQAEEPSA GEPVSGHQKD 240 LPQETTGLPQ QEKALSATEP FAGHQKEHVD NSGDHEIHDG ACHIAEEPLA FDVASNLGTC 300 KSPEPEVHEH DSSKDLEFSI ADCSGSFDRS HEISKIPQDV PCTTDAPGEK SCADDPMDCA 360 DITLPKQVPE HCDMLDHKFR GFPGETGFND QVENNPLSAN LDEPDLSSNS MEVDNSKIAC 420 KFGDVLNSTS SEYDKPVVDQ TDRGVTALKN DAINIDDGMN IDVRIKEVNL NSCLDTISSP 480 VSGANCETSN ALHDGNRSSI LAQCFGASSN DDNVCQDESF VNQNNVSKAE IFVNQSNDMV 540 YQSNLNMNPV SPPQISVDYF TNCSMNSEIK NNDNRRDDNA KEQFVNSRNI SSNEPGFDAE 600 AYNNDIFTGA MAETSFAQLN NAMNMKTDYS SCYSISDLNT LTGGTGTDGI DFHGMRSSFV 660 SGSTSRSEPN ELDFDIKGSM LEALERSDSD LETQYNGGDP AIDSLPAAGT SGTSVDDFMS 720 MHTNFGSLTS LVRSVEGGPM SRLIQDQCDL QLGFGAQKQQ IYPSFEEHLR MASAGAPQFG 780 NMGRHNPMPV PVPVPEPTLM LGYEPTLMLG YAPQFGSCPP VQLGWDLSKM VGVLQSVCVW 840 CNTRFQHFGT AEQQNDSVGF ICPACKDKTS GHLGTLNNGS LL

Sequence ? help Back to Top

Protein Sequence Length: 882 aa Download sequence

LSSSTSPQTL TTTWVADQGP RGHQFATCRE VSSYFMSLLG YVEAKPTTVQ NNDVEVRDLS  60
AVNTAGLHQQ NDSTGDMQSA VSATSVTLPI HNGDSQGQRQ KPYKDEAPIE AVRKECKKCN  120
LTFEDQSAYV QHQLSFHQRK AKRRKVDKSV GLGVGKDGKL ETQESQRTCE DKPGYFDHGV  180
ADVKSQGQSP AELFGGASSG DVGAQLSLAA APCGLQEITG LPEQAEEPSA GEPVSGHQKD  240
LPQETTGLPQ QEKALSATEP FAGHQKEHVD NSGDHEIHDG ACHIAEEPLA FDVASNLGTC  300
KSPEPEVHEH DSSKDLEFSI ADCSGSFDRS HEISKIPQDV PCTTDAPGEK SCADDPMDCA  360
DITLPKQVPE HCDMLDHKFR GFPGETGFND QVENNPLSAN LDEPDLSSNS MEVDNSKIAC  420
KFGDVLNSTS SEYDKPVVDQ TDRGVTALKN DAINIDDGMN IDVRIKEVNL NSCLDTISSP  480
VSGANCETSN ALHDGNRSSI LAQCFGASSN DDNVCQDESF VNQNNVSKAE IFVNQSNDMV  540
YQSNLNMNPV SPPQISVDYF TNCSMNSEIK NNDNRRDDNA KEQFVNSRNI SSNEPGFDAE  600
AYNNDIFTGA MAETSFAQLN NAMNMKTDYS SCYSISDLNT LTGGTGTDGI DFHGMRSSFV  660
SGSTSRSEPN ELDFDIKGSM LEALERSDSD LETQYNGGDP AIDSLPAAGT SGTSVDDFMS  720
MHTNFGSLTS LVRSVEGGPM SRLIQDQCDL QLGFGAQKQQ IYPSFEEHLR MASAGAPQFG  780
NMGRHNPMPV PVPVPEPTLM LGYEPTLMLG YAPQFGSCPP VQLGWDLSKM VGVLQSVCVW  840
CNTRFQHFGT AEQQNDSVGF ICPACKDKTS GHLGTLNNGS LL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	145	QRKAKRRK

Link Out ? help Back to Top
Ensembl	TRIDC5AG039080.7