PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG039080.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 717aa MW: 77364.2 Da PI: 4.1921

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG039080.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	7.4e-05	80	102	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++C+ +F ++s +++H+ + H TRIDC5AG039080.1 80 ECKKCNLTFEDQSAYVQHQLSfH 102 5******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 717 aa Download sequence
MSLLGYVEAK PTTVQNNDVE VRDLSAVNTA GLHQQNDSTG DMQSAVSATS VTLPIHNGDS 60 QGQRQKPYKD EAPIEAVRKE CKKCNLTFED QSAYVQHQLS FHQRKAKRRK VDKSVGLGVG 120 KDGKLETQES QRTCEDKPGY FDHGVADVKS QGQSPAELFG GASSGDVGAQ LSLAAAPCGL 180 QEITGLPEQA EEPSAGEPVS GHQKDLPQET TGLPQQEKAL SATEPFAGHQ KEHVDNSGDH 240 EIHDGACHIA EEPLAFDVAS NLGTCKSPEP EVHEHDSSKD LEFSIADCSG SFDRSHEISK 300 IPQDVPCTTD APGEKSCADD PMDCADITLP KQVPEHCDML DHKFRGFPGE TGFNDQVENN 360 PLSANLDEPD LSSNSMEVDN SKIACKFGDV LNSTSSEYDK PVVDQTDRGV TALKNDAINI 420 DDGMNIDVRI KEVNLNSCLD TISSPVSGAN CETSNALHDG NRSSILAQCF GASSNDDNVC 480 QDESFVNQNN VSKAEIFVNQ SNDMVYQSNL NMNPVSPPQI SVDYFTNCSM NSEIKNNDNR 540 RDDNAKEQFV NSRNISSNEP GFDAEAYNND IFTGAMAETS FAQLNNAMNM KTDYSSCYSI 600 SDLNTLTGGT GTDGIDFHGM RSSFVSGSTS RSEPNELDFD IKGSMLEALE RSDSDLETQY 660 NGGDPAIDSL PAAGTSGTSV DDFMSMHTNF GSLTSLVRSV EGGPMSRLIQ DQCDLQL

Sequence ? help Back to Top

Protein Sequence Length: 717 aa Download sequence

MSLLGYVEAK PTTVQNNDVE VRDLSAVNTA GLHQQNDSTG DMQSAVSATS VTLPIHNGDS  60
QGQRQKPYKD EAPIEAVRKE CKKCNLTFED QSAYVQHQLS FHQRKAKRRK VDKSVGLGVG  120
KDGKLETQES QRTCEDKPGY FDHGVADVKS QGQSPAELFG GASSGDVGAQ LSLAAAPCGL  180
QEITGLPEQA EEPSAGEPVS GHQKDLPQET TGLPQQEKAL SATEPFAGHQ KEHVDNSGDH  240
EIHDGACHIA EEPLAFDVAS NLGTCKSPEP EVHEHDSSKD LEFSIADCSG SFDRSHEISK  300
IPQDVPCTTD APGEKSCADD PMDCADITLP KQVPEHCDML DHKFRGFPGE TGFNDQVENN  360
PLSANLDEPD LSSNSMEVDN SKIACKFGDV LNSTSSEYDK PVVDQTDRGV TALKNDAINI  420
DDGMNIDVRI KEVNLNSCLD TISSPVSGAN CETSNALHDG NRSSILAQCF GASSNDDNVC  480
QDESFVNQNN VSKAEIFVNQ SNDMVYQSNL NMNPVSPPQI SVDYFTNCSM NSEIKNNDNR  540
RDDNAKEQFV NSRNISSNEP GFDAEAYNND IFTGAMAETS FAQLNNAMNM KTDYSSCYSI  600
SDLNTLTGGT GTDGIDFHGM RSSFVSGSTS RSEPNELDFD IKGSMLEALE RSDSDLETQY  660
NGGDPAIDSL PAAGTSGTSV DDFMSMHTNF GSLTSLVRSV EGGPMSRLIQ DQCDLQL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	110	QRKAKRRK

Link Out ? help Back to Top
Ensembl	TRIDC5AG039080.1